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Results:
1-24
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Results: 24
Authors:
CREVELD LD
AMADEI A
VANSCHAIK RC
PEPERMANS HAM
DEVLIEG J
BERENDSEN HJC
Citation: Ld. Creveld et al., IDENTIFICATION OF FUNCTIONAL AND UNFOLDING MOTIONS OF CUTINASE AS OBTAINED FROM MOLECULAR-DYNAMICS COMPUTER-SIMULATIONS, Proteins, 33(2), 1998, pp. 253-264
Authors:
DEGROOT BL
HAYWARD S
VANAALTEN DMF
AMADEI A
BERENDSEN HJC
Citation: Bl. Degroot et al., DOMAIN MOTIONS IN BACTERIOPHAGE-T4 LYSOZYME - A COMPARISON BETWEEN MOLECULAR-DYNAMICS AND CRYSTALLOGRAPHIC DATA, Proteins, 31(2), 1998, pp. 116-127
Authors:
AMADEI A
APOL MEF
BERENDSEN HJC
Citation: A. Amadei et al., ON THE USE OF THE QUASI-GAUSSIAN ENTROPY THEORY IN NONCANONICAL ENSEMBLES - I - PREDICTION OF TEMPERATURE-DEPENDENCE OF THERMODYNAMIC PROPERTIES, The Journal of chemical physics, 109(8), 1998, pp. 3004-3016
Authors:
APOL MEF
AMADEI A
BERENDSEN HJC
Citation: Mef. Apol et al., ON THE USE OF THE QUASI-GAUSSIAN ENTROPY THEORY IN NONCANONICAL ENSEMBLES - II - PREDICTION OF DENSITY-DEPENDENCE OF THERMODYNAMIC PROPERTIES, The Journal of chemical physics, 109(8), 1998, pp. 3017-3027
Authors:
ROCCATANO D
AMADEI A
APOL MEF
DINORA A
BERENDSEN HJC
Citation: D. Roccatano et al., APPLICATION OF THE QUASI-GAUSSIAN ENTROPY THEORY TO MOLECULAR-DYNAMICS SIMULATIONS OF LENNARD-JONES FLUIDS, The Journal of chemical physics, 109(15), 1998, pp. 6358-6363
Authors:
DEGROOT BL
VANAALTEN DMF
SCHEEK RM
AMADEI A
VRIEND G
BERENDSEN HJC
Citation: Bl. Degroot et al., PREDICTION OF PROTEIN CONFORMATIONAL FREEDOM FROM DISTANCE CONSTRAINTS, Proteins, 29(2), 1997, pp. 240-251
Authors:
VANAALTEN DMF
DEGROOT BL
FINDLAY JBC
BERENDSEN HJC
AMADEI A
Citation: Dmf. Vanaalten et al., A COMPARISON OF TECHNIQUES FOR CALCULATING PROTEIN ESSENTIAL DYNAMICS, Journal of computational chemistry, 18(2), 1997, pp. 169-181
Authors:
AMADEI A
APOL MEF
BERENDSEN HJC
Citation: A. Amadei et al., EXTENSIONS OF THE QUASI-GAUSSIAN ENTROPY THEORY, The Journal of chemical physics, 106(5), 1997, pp. 1893-1912
Authors:
VANAALTEN DMF
CONN DA
DEGROOT BL
BERENDSEN HJC
FINDLAY JBC
AMADEI A
Citation: Dmf. Vanaalten et al., PROTEIN DYNAMICS DERIVED FROM CLUSTERS OF CRYSTAL-STRUCTURES, Biophysical journal, 73(6), 1997, pp. 2891-2896
Authors:
CHILLEMI G
FALCONI M
AMADEI A
ZIMATORE G
DESIDERI A
DINOLA A
Citation: G. Chillemi et al., THE ESSENTIAL DYNAMICS OF CU, ZN SUPEROXIDE-DISMUTASE - SUGGESTION OFINTERSUBUNIT COMMUNICATION, Biophysical journal, 73(2), 1997, pp. 1007-1018
Authors:
DEGROOT BL
AMADEI A
SCHEEK RM
VANNULAND NAJ
BERENDSEN HJC
Citation: Bl. Degroot et al., AN EXTENDED SAMPLING OF THE CONFIGURATIONAL SPACE OF HPR FROM ESCHERICHIA-COLI, Proteins, 26(3), 1996, pp. 314-322
Authors:
AMADEI A
VALLONE B
Citation: A. Amadei et B. Vallone, IDENTIFICATION OF A PATTERN IN PROTEIN-STRUCTURE BASED ON ENERGETIC AND STATISTICAL CONSIDERATIONS, Proteins, 24(1), 1996, pp. 35-50
Authors:
DEGROOT BL
AMADEI A
VANAALTEN DMF
BERENDSEN HJC
Citation: Bl. Degroot et al., TOWARDS AN EXHAUSTIVE SAMPLING OF THE CONFIGURATIONAL SPACES OF THE 2FORMS OF THE PEPTIDE-HORMONE GUANYLIN, Journal of biomolecular structure & dynamics, 13(5), 1996, pp. 741-751
Authors:
AMADEI A
LINSSEN ABM
DEGROOT BL
VANAALTEN DMF
BERENDSEN HJC
Citation: A. Amadei et al., AN EFFICIENT METHOD FOR SAMPLING THE ESSENTIAL SUBSPACE OF PROTEINS, Journal of biomolecular structure & dynamics, 13(4), 1996, pp. 615-625
Authors:
AMADEI A
ROCCATANO D
APOL MEF
BERENDSEN HJC
DINOLA A
Citation: A. Amadei et al., PREDICTION OF THE LIQUID-VAPOR-EQUILIBRIUM PRESSURE USING THE QUASI-GAUSSIAN ENTROPY THEORY, The Journal of chemical physics, 105(16), 1996, pp. 7022-7025
Authors:
AMADEI A
APOL MEF
DINOLA A
BERENDSEN HJC
Citation: A. Amadei et al., THE QUASI-GAUSSIAN ENTROPY THEORY - FREE-ENERGY CALCULATIONS BASED ONTHE POTENTIAL-ENERGY DISTRIBUTION FUNCTION, The Journal of chemical physics, 104(4), 1996, pp. 1560-1574
Authors:
APOL MEF
AMADEI A
BERENDSEN HJC
Citation: Mef. Apol et al., APPLICATION OF THE QUASI-GAUSSIAN ENTROPY THEORY TO THE CALCULATION OF THERMODYNAMIC PROPERTIES OF WATER AND METHANE IN THE LIQUID AND GAS-PHASE, The Journal of chemical physics, 104(17), 1996, pp. 6665-6678
Authors:
APOL MEF
AMADEI A
BERENDSEN HJC
Citation: Mef. Apol et al., DERIVATION OF A THERMODYNAMIC CLOSURE RELATION IN THE ISOTHERMAL-ISOBARIC ENSEMBLE USING QUASI-GAUSSIAN ENTROPY THEORY, Chemical physics letters, 256(1-2), 1996, pp. 172-178
Authors:
DEGROOT BL
VANAALTEN DMF
AMADEI A
BERENDSEN HJC
Citation: Bl. Degroot et al., THE CONSISTENCY OF LARGE CONCERTED MOTIONS IN PROTEINS IN MOLECULAR-DYNAMICS SIMULATIONS, Biophysical journal, 71(4), 1996, pp. 1707-1713
Authors:
VANAALTEN DMF
AMADEI A
BYWATER R
FINDLAY JBC
BERENDSEN HJC
SANDER C
STOUTEN PFW
Citation: Dmf. Vanaalten et al., COMPARISON OF STRUCTURAL AND DYNAMIC PROPERTIES OF DIFFERENT SIMULATION METHODS APPLIED TO SH3, Biophysical journal, 70(2), 1996, pp. 684-692
Authors:
SCHEEK RM
VANNULAND NAJ
DEGROOT BL
AMADEI A
Citation: Rm. Scheek et al., STRUCTURE FROM NMR AND MOLECULAR-DYNAMICS - DISTANCE RESTRAINING INHIBITS MOTION IN THE ESSENTIAL SUBSPACE, Journal of biomolecular NMR, 6(1), 1995, pp. 106-111
Authors:
VANAALTEN DMF
AMADEI A
LINSSEN ABM
EIJSINK VGH
VRIEND G
BERENDSEN HJC
Citation: Dmf. Vanaalten et al., THE ESSENTIAL DYNAMICS OF THERMOLYSIN - CONFIRMATION OF THE HINGE-BENDING MOTION AND COMPARISON OF SIMULATIONS IN VACUUM AND WATER, Proteins, 22(1), 1995, pp. 45-54
Authors:
VANAALTEN DMF
FINDLAY JBC
AMADEI A
BERENDSEN HJC
Citation: Dmf. Vanaalten et al., ESSENTIAL DYNAMICS OF THE CELLULAR RETINOL-BINDING PROTEIN - EVIDENCEFOR LIGAND-INDUCED CONFORMATIONAL-CHANGES, Protein engineering, 8(11), 1995, pp. 1129-1135
Authors:
AMADEI A
LINSSEN ABM
BERENDSEN HJC
Citation: A. Amadei et al., ESSENTIAL DYNAMICS OF PROTEINS, Proteins, 17(4), 1993, pp. 412-425
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