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Results: 1-25/38
Authors:
KOLINSKI A
JAROSZEWSKI L
ROTKIEWICZ P
SKOLNICK J
Citation: A. Kolinski et al., AN EFFICIENT MONTE-CARLO MODEL OF PROTEIN CHAINS - MODELING THE SHORT-RANGE CORRELATIONS BETWEEN SIDE-GROUP CENTERS OF MASS, JOURNAL OF PHYSICAL CHEMISTRY B, 102(23), 1998, pp. 4628-4637
Authors:
KOLINSKI A
SKOLNICK J
Citation: A. Kolinski et J. Skolnick, ASSEMBLY OF PROTEIN-STRUCTURE FROM SPARSE EXPERIMENTAL-DATA - AN EFFICIENT MONTE-CARLO MODEL, Proteins, 32(4), 1998, pp. 475-494
Authors:
ORTIZ AR
KOLINSKI A
SKOLNICK J
Citation: Ar. Ortiz et al., TERTIARY STRUCTURE PREDICTION OF THE KIX DOMAIN OF CBP USING MONTE-CARLO SIMULATIONS DRIVEN BY RESTRAINTS DERIVED FROM MULTIPLE SEQUENCE ALIGNMENTS, Proteins, 30(3), 1998, pp. 287-294
Authors:
SKOLNICK J
KOLINSKI A
ORTIZ AR
Citation: J. Skolnick et al., REDUCED PROTEIN MODELS AND THEIR APPLICATION TO THE PROTEIN-FOLDING PROBLEM, Journal of biomolecular structure & dynamics, 16(2), 1998, pp. 381-396
Authors:
VIETH M
HIRST JD
KOLINSKI A
BROOKS CL
Citation: M. Vieth et al., ASSESSING ENERGY FUNCTIONS FOR FLEXIBLE DOCKING, Journal of computational chemistry, 19(14), 1998, pp. 1612-1622
Authors:
ORTIZ AR
KOLINSKI A
SKOLNICK J
Citation: Ar. Ortiz et al., NATIVE-LIKE TOPOLOGY ASSEMBLY OF SMALL PROTEINS USING PREDICTED RESTRAINTS IN MONTE-CARLO FOLDING SIMULATIONS, Proceedings of the National Academy of Sciences of the United Statesof America, 95(3), 1998, pp. 1020-1025
Authors:
ORTIZ AR
KOLINSKI A
SKOLNICK J
Citation: Ar. Ortiz et al., FOLD ASSEMBLY OF SMALL PROTEINS USING MONTE-CARLO SIMULATIONS DRIVEN BY RESTRAINTS DERIVED FROM MULTIPLE SEQUENCE ALIGNMENTS, Journal of Molecular Biology, 277(2), 1998, pp. 419-448
Authors:
KOLINSKI A
GALAZKA W
SKOLNICK J
Citation: A. Kolinski et al., MONTE-CARLO STUDIES OF THE THERMODYNAMICS AND KINETICS OF REDUCED PROTEIN MODELS - APPLICATION TO SMALL HELICAL, BETA-PROTEIN, AND ALPHA BETA-PROTEIN/, The Journal of chemical physics, 108(6), 1998, pp. 2608-2617
Authors:
SIKORSKI A
KOLINSKI A
SKOLNICK J
Citation: A. Sikorski et al., COMPUTER-SIMULATIONS OF DE-NOVO DESIGNED HELICAL PROTEINS, Biophysical journal, 75(1), 1998, pp. 92-105
Authors:
SKOLNICK J
JAROSZEWSKI L
KOLINSKI A
GODZIK A
Citation: J. Skolnick et al., DERIVATION AND TESTING OF PAIR POTENTIALS FOR PROTEIN-FOLDING - WHEN IS THE QUASI-CHEMICAL APPROXIMATION CORRECT, Protein science, 6(3), 1997, pp. 676-688
Authors:
HU WP
KOLINSKI A
SKOLNICK J
Citation: Wp. Hu et al., IMPROVED METHOD FOR PREDICTION OF PROTEIN BACKBONE U-TURN POSITIONS AND MAJOR SECONDARY STRUCTURAL ELEMENTS BETWEEN U-TURNS, Proteins, 29(4), 1997, pp. 443-460
Authors:
KOLINSKI A
SKOLNICK J
GODZIK A
HU WP
Citation: A. Kolinski et al., A METHOD FOR THE PREDICTION OF SURFACE U-TURNS AND TRANSGLOBULAR CONNECTIONS IN SMALL PROTEINS, Proteins, 27(2), 1997, pp. 290-308
Authors:
MILIK M
KOLINSKI A
SKOLNICK J
Citation: M. Milik et al., ALGORITHM FOR RAPID RECONSTRUCTION OF PROTEIN BACKBONE FROM ALPHA-CARBON COORDINATES, Journal of computational chemistry, 18(1), 1997, pp. 80-85
Authors:
SKOLNICK J
KOLINSKI A
ORTIZ AR
Citation: J. Skolnick et al., MONSSTER - A METHOD FOR FOLDING GLOBULAR-PROTEINS WITH A SMALL NUMBEROF DISTANCE RESTRAINTS, Journal of Molecular Biology, 265(2), 1997, pp. 217-241
Authors:
KOLINSKI A
SKOLNICK J
Citation: A. Kolinski et J. Skolnick, DETERMINANTS OF SECONDARY STRUCTURE OF POLYPEPTIDE-CHAINS - INTERPLAYBETWEEN SHORT-RANGE AND BURIAL INTERACTIONS, The Journal of chemical physics, 107(3), 1997, pp. 953-964
Authors:
KOLINSKI A
MADZIAR P
Citation: A. Kolinski et P. Madziar, COLLAPSE TRANSITIONS IN PROTEIN-LIKE LATTICE POLYMERS - THE EFFECT OFSEQUENCE PATTERNS, Biopolymers, 42(5), 1997, pp. 537-548
Authors:
KOLINSKI A
SKOLNICK J
Citation: A. Kolinski et J. Skolnick, HIGH COORDINATION LATTICE MODELS OF PROTEIN-STRUCTURE, DYNAMICS AND THERMODYNAMICS, Acta Biochimica Polonica, 44(3), 1997, pp. 389-422
Authors:
KOLINSKI A
GALAZKA W
SKOLNICK J
Citation: A. Kolinski et al., ON THE ORIGIN OF THE COOPERATIVITY OF PROTEIN-FOLDING - IMPLICATIONS FROM MODEL SIMULATIONS, Proteins, 26(3), 1996, pp. 271-287
Authors:
OLSZEWSKI KA
KOLINSKI A
SKOLNICK J
Citation: Ka. Olszewski et al., FOLDING SIMULATIONS AND COMPUTER REDESIGN OF PROTEIN-A 3-HELIX BUNDLEMOTIFS, Proteins, 25(3), 1996, pp. 286-299
Authors:
OLSZEWSKI KA
KOLINSKI A
SKOLNICK J
Citation: Ka. Olszewski et al., DOES A BACKWARDLY READ PROTEIN-SEQUENCE HAVE A UNIQUE NATIVE-STATE, Protein engineering, 9(1), 1996, pp. 5-14
Authors:
VIETH M
KOLINSKI A
SKOLNICK J
Citation: M. Vieth et al., METHOD FOR PREDICTING THE STATE OF ASSOCIATION OF DISCRETIZED PROTEINMODELS - APPLICATION TO LEUCINE ZIPPERS, Biochemistry, 35(3), 1996, pp. 955-967
Authors:
GODZIK A
KOLINSKI A
SKOLNICK J
Citation: A. Godzik et al., ARE PROTEINS IDEAL MIXTURES OF AMINO-ACIDS - ANALYSIS OF ENERGY PARAMETER SETS, Protein science, 4(10), 1995, pp. 2107-2117
Authors:
MILIK M
KOLINSKI A
SKOLNICK J
Citation: M. Milik et al., NEURAL-NETWORK SYSTEM FOR THE EVALUATION OF SIDE-CHAIN PACKING IN PROTEIN STRUCTURES, Protein engineering, 8(3), 1995, pp. 225-236
Authors:
VIETH M
KOLINSKI A
BROOKS CL
SKOLNICK J
Citation: M. Vieth et al., PREDICTION OF QUATERNARY STRUCTURE OF COILED COILS - APPLICATION TO MUTANTS OF THE GCN4 LEUCINE-ZIPPER, Journal of Molecular Biology, 251(3), 1995, pp. 448-467
Authors:
KOLINSKI A
GALAZKA W
SKOLNICK J
Citation: A. Kolinski et al., COMPUTER DESIGN OF IDEALIZED BETA-MOTIFS, The Journal of chemical physics, 103(23), 1995, pp. 10286-10297