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Results:
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Results: 20
Authors:
Damborsky, J
Prokop, M
Koca, J
Citation: J. Damborsky et al., TRITON: graphic software for rational engineering of enzymes, TRENDS BIOC, 26(1), 2001, pp. 71-73
Authors:
Kriz, Z
Carlsen, PHJ
Koca, J
Citation: Z. Kriz et al., Conformational features of linear and cyclic enkephalins. A computational study, J MOL ST-TH, 540, 2001, pp. 231-250
Authors:
Stefl, R
Trantirek, L
Vorlickova, M
Koca, J
Sklenar, V
Kypr, J
Citation: R. Stefl et al., A-like guanine-guanine stacking in the aqueous DNA duplex of d(GGGGCCCC), J MOL BIOL, 307(2), 2001, pp. 513-524
Authors:
Petrova, P
Koca, J
Imberty, A
Citation: P. Petrova et al., Molecular dynamics simulations of solvated UDP-glucose in interaction withMg2+ cations, EUR J BIOCH, 268(20), 2001, pp. 5365-5374
Authors:
Petrova, P
Monteiro, C
de Penhoat, CH
Koca, J
Imberty, A
Citation: P. Petrova et al., Conformational behavior of nucleotide-sugar in solution: Molecular dynamics and NMR study of solvated uridine diphosphate-glucose in the presence of monovalent cations, BIOPOLYMERS, 58(7), 2001, pp. 617-635
Authors:
Stefl, R
Spackova, N
Berger, I
Koca, J
Sponer, J
Citation: R. Stefl et al., Molecular dynamics of DNA quadruplex molecules containing inosine, 6-thioguanine and 6-thiopurine, BIOPHYS J, 80(1), 2001, pp. 455-468
Authors:
Koca, J
Zhan, CG
Rittenhouse, RC
Ornstein, RL
Citation: J. Koca et al., Mobility of the active site bound paraoxon and sarin in zinc-phosphotriesterase by molecular dynamics simulation and quantum chemical calculation, J AM CHEM S, 123(5), 2001, pp. 817-826
Authors:
Prokop, M
Damborsky, J
Koca, J
Citation: M. Prokop et al., TRITON: in silico construction of protein mutants and prediction of their activities, BIOINFORMAT, 16(9), 2000, pp. 845-846
Authors:
Petrova, P
Koca, J
Imberty, A
Citation: P. Petrova et al., Effect of cation concentration on molecular dynamics simulations of UDP-glucose, MOL SIMULAT, 24(4-6), 2000, pp. 325
Authors:
Cajan, M
Damborsky, J
Stibor, I
Koca, J
Citation: M. Cajan et al., Stability of complexes of aromatic-amides with bromide anion: Quantitativestructure-property relationships, J CHEM INF, 40(5), 2000, pp. 1151-1157
Authors:
Trantirek, L
Stefl, R
Vorlickova, M
Koca, J
Sklenar, V
Kypr, J
Citation: L. Trantirek et al., An A-type double helix of DNA having B-type puckering of the deoxyribose rings, J MOL BIOL, 297(4), 2000, pp. 907-922
Authors:
Otyepka, M
Krystof, V
Havlicek, L
Siglerova, V
Strnad, M
Koca, J
Citation: M. Otyepka et al., Docking-based development of purine-like inhibitors of cyclin-dependent kinase-2, J MED CHEM, 43(13), 2000, pp. 2506-2513
Authors:
Picard, C
Gruza, J
Derouet, C
Renard, CMGC
Mazeau, K
Koca, J
Imberty, A
du Penhoat, CH
Citation: C. Picard et al., A conformational study of the xyloglucan oligomer, XXXG, by NMR spectroscopy and molecular modeling, BIOPOLYMERS, 54(1), 2000, pp. 11-26
Authors:
Stefl, R
Koca, J
Citation: R. Stefl et J. Koca, Unrestrained molecular dynamics simulations of [d(AT)(5)](2) duplex in aqueous solution: Hydration and binding of sodium ions in the minor groove, J AM CHEM S, 122(21), 2000, pp. 5025-5033
Authors:
Cajan, M
Stibor, I
Koca, J
Citation: M. Cajan et al., Computational studies on the stability of [amide]Br- complexes, J PHYS CH A, 103(19), 1999, pp. 3778-3782
Authors:
Stefl, R
Fadrna, E
Koca, J
Citation: R. Stefl et al., Differences in conformational behavior of ATA and TAT sequences in single strand DNA trimer, J BIO STRUC, 16(5), 1999, pp. 1087-1095
Authors:
Damborsky, J
Koca, J
Citation: J. Damborsky et J. Koca, Analysis of the reaction mechanism and substrate specificity of haloalkanedehalogenases by sequential and structural comparisons, PROTEIN ENG, 12(11), 1999, pp. 989-998
Authors:
Cernohorsky, M
Vaultier, M
Koca, J
Citation: M. Cernohorsky et al., Comparison of conformational behavior of the short alanine peptides and their boron analogues, THEOCHEM, 489(2-3), 1999, pp. 213-224
Authors:
Cernohorsky, M
Kettou, S
Koca, J
Citation: M. Cernohorsky et al., VADER: New software for exploring interconversions on potential energy surfaces, J CHEM INF, 39(4), 1999, pp. 705-712
Authors:
Petrova, P
Koca, J
Imberty, A
Citation: P. Petrova et al., Potential energy hypersurfaces of nucleotide sugars: Ab initio calculations, force-field parametrization, and exploration of the flexibility, J AM CHEM S, 121(23), 1999, pp. 5535-5547
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