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Results: 1-25 |
Results: 25
COMPARATIVE BINDING-ENERGY ANALYSIS
Authors: WADE RC ORTIZ AR GAGO F
Citation: Rc. Wade et al., COMPARATIVE BINDING-ENERGY ANALYSIS, Perspectives in drug discovery and design, 9-11, 1998, pp. 19-34
TERTIARY STRUCTURE PREDICTION OF THE KIX DOMAIN OF CBP USING MONTE-CARLO SIMULATIONS DRIVEN BY RESTRAINTS DERIVED FROM MULTIPLE SEQUENCE ALIGNMENTS
Authors: ORTIZ AR KOLINSKI A SKOLNICK J
Citation: Ar. Ortiz et al., TERTIARY STRUCTURE PREDICTION OF THE KIX DOMAIN OF CBP USING MONTE-CARLO SIMULATIONS DRIVEN BY RESTRAINTS DERIVED FROM MULTIPLE SEQUENCE ALIGNMENTS, Proteins, 30(3), 1998, pp. 287-294
REDUCED PROTEIN MODELS AND THEIR APPLICATION TO THE PROTEIN-FOLDING PROBLEM
Authors: SKOLNICK J KOLINSKI A ORTIZ AR
Citation: J. Skolnick et al., REDUCED PROTEIN MODELS AND THEIR APPLICATION TO THE PROTEIN-FOLDING PROBLEM, Journal of biomolecular structure & dynamics, 16(2), 1998, pp. 381-396
NATIVE-LIKE TOPOLOGY ASSEMBLY OF SMALL PROTEINS USING PREDICTED RESTRAINTS IN MONTE-CARLO FOLDING SIMULATIONS
Authors: ORTIZ AR KOLINSKI A SKOLNICK J
Citation: Ar. Ortiz et al., NATIVE-LIKE TOPOLOGY ASSEMBLY OF SMALL PROTEINS USING PREDICTED RESTRAINTS IN MONTE-CARLO FOLDING SIMULATIONS, Proceedings of the National Academy of Sciences of the United Statesof America, 95(3), 1998, pp. 1020-1025
FOLD ASSEMBLY OF SMALL PROTEINS USING MONTE-CARLO SIMULATIONS DRIVEN BY RESTRAINTS DERIVED FROM MULTIPLE SEQUENCE ALIGNMENTS
Authors: ORTIZ AR KOLINSKI A SKOLNICK J
Citation: Ar. Ortiz et al., FOLD ASSEMBLY OF SMALL PROTEINS USING MONTE-CARLO SIMULATIONS DRIVEN BY RESTRAINTS DERIVED FROM MULTIPLE SEQUENCE ALIGNMENTS, Journal of Molecular Biology, 277(2), 1998, pp. 419-448
COMPARATIVE BINDING-ENERGY ANALYSIS OF HIV-1 PROTEASE INHIBITORS - INCORPORATION OF SOLVENT EFFECTS AND VALIDATION AS A POWERFUL TOOL IN RECEPTOR-BASED DRUG DESIGN
Authors: PEREZ C PASTOR M ORTIZ AR GAGO F
Citation: C. Perez et al., COMPARATIVE BINDING-ENERGY ANALYSIS OF HIV-1 PROTEASE INHIBITORS - INCORPORATION OF SOLVENT EFFECTS AND VALIDATION AS A POWERFUL TOOL IN RECEPTOR-BASED DRUG DESIGN, Journal of medicinal chemistry, 41(6), 1998, pp. 836-852
ROLE OF A NONNATIVE INTERACTION IN THE FOLDING OF THE PROTEIN-G B1 DOMAIN AS INFERRED FROM THE CONFORMATIONAL-ANALYSIS OF THE ALPHA-HELIX FRAGMENT
Authors: BLANCO FJ ORTIZ AR SERRANO L
Citation: Fj. Blanco et al., ROLE OF A NONNATIVE INTERACTION IN THE FOLDING OF THE PROTEIN-G B1 DOMAIN AS INFERRED FROM THE CONFORMATIONAL-ANALYSIS OF THE ALPHA-HELIX FRAGMENT, Folding & design, 2(2), 1997, pp. 123-133
H-1 AND N-15 NMR ASSIGNMENT AND SOLUTION STRUCTURE OF THE SH3 DOMAIN OF SPECTRIN - COMPARISON OF UNREFINED AND REFINED STRUCTURE SETS WITH THE CRYSTAL-STRUCTURE
Authors: BLANCO FJ ORTIZ AR SERRANO L
Citation: Fj. Blanco et al., H-1 AND N-15 NMR ASSIGNMENT AND SOLUTION STRUCTURE OF THE SH3 DOMAIN OF SPECTRIN - COMPARISON OF UNREFINED AND REFINED STRUCTURE SETS WITH THE CRYSTAL-STRUCTURE, Journal of biomolecular NMR, 9(4), 1997, pp. 347-357
STRUCTURE-AFFINITY RELATIONSHIPS FOR THE BINDING OF ACTINOMYCIN-D TO DNA
Authors: GALLEGO J ORTIZ AR DEPASCUALTERESA B GAGO F
Citation: J. Gallego et al., STRUCTURE-AFFINITY RELATIONSHIPS FOR THE BINDING OF ACTINOMYCIN-D TO DNA, Journal of computer-aided molecular design, 11(2), 1997, pp. 114-128
MONSSTER - A METHOD FOR FOLDING GLOBULAR-PROTEINS WITH A SMALL NUMBEROF DISTANCE RESTRAINTS
Authors: SKOLNICK J KOLINSKI A ORTIZ AR
Citation: J. Skolnick et al., MONSSTER - A METHOD FOR FOLDING GLOBULAR-PROTEINS WITH A SMALL NUMBEROF DISTANCE RESTRAINTS, Journal of Molecular Biology, 265(2), 1997, pp. 217-241
RELIABILITY OF COMPARATIVE MOLECULAR-FIELD ANALYSIS MODELS - EFFECTS OF DATA SCALING AND VARIABLE SELECTION USING A SET OF HUMAN SYNOVIAL-FLUID PHOSPHOLIPASE A(2) INHIBITORS
Authors: ORTIZ AR PASTOR M PALOMER A CRUCIANI G GAGO F WADE RC
Citation: Ar. Ortiz et al., RELIABILITY OF COMPARATIVE MOLECULAR-FIELD ANALYSIS MODELS - EFFECTS OF DATA SCALING AND VARIABLE SELECTION USING A SET OF HUMAN SYNOVIAL-FLUID PHOSPHOLIPASE A(2) INHIBITORS, Journal of medicinal chemistry, 40(7), 1997, pp. 1136-1148
ASSESSMENT OF SOLVATION EFFECTS ON CALCULATED BINDING-AFFINITY DIFFERENCES - TRYPSIN INHIBITION BY FLAVONOIDS AS A MODEL SYSTEM FOR CONGENERIC SERIES
Authors: CHECA A ORTIZ AR DEPASCUALTERESA B GAGO F
Citation: A. Checa et al., ASSESSMENT OF SOLVATION EFFECTS ON CALCULATED BINDING-AFFINITY DIFFERENCES - TRYPSIN INHIBITION BY FLAVONOIDS AS A MODEL SYSTEM FOR CONGENERIC SERIES, Journal of medicinal chemistry, 40(25), 1997, pp. 4136-4145
RELIABILITY OF COMFA MODELS - EFFECTS OF DATA SCALING AND VARIABLE SELECTION USING A SET OF HUMAN SYNOVIAL-FLUID PHOSPHOLIPASE A(2) INHIBITORS (VOL 40, PG 1138, 1997)
Authors: ORTIZ AR PASTOR M PALOMER A CRUCIANI G GAGO F WADE RC
Citation: Ar. Ortiz et al., RELIABILITY OF COMFA MODELS - EFFECTS OF DATA SCALING AND VARIABLE SELECTION USING A SET OF HUMAN SYNOVIAL-FLUID PHOSPHOLIPASE A(2) INHIBITORS (VOL 40, PG 1138, 1997), Journal of medicinal chemistry, 40(25), 1997, pp. 4168-4168
PREDICTION OF DRUG-BINDING AFFINITIES BY COMPARATIVE BINDING-ENERGY ANALYSIS (VOL 38, PG 2682, 1995)
Authors: ORTIZ AR PISABARRO MT GAGO F WADE RC
Citation: Ar. Ortiz et al., PREDICTION OF DRUG-BINDING AFFINITIES BY COMPARATIVE BINDING-ENERGY ANALYSIS (VOL 38, PG 2682, 1995), Journal of medicinal chemistry, 40(25), 1997, pp. 4168-4168
EFFECTS OF LOCOWEED (OXYTROPIS-SERICEA) ON GROWTH, REPRODUCTION, AND SERUM HORMONE PROFILES IN YOUNG RAMS
Authors: ORTIZ AR HALLFORD DM GALYEAN ML SCHNEIDER FA KRIDLI RT
Citation: Ar. Ortiz et al., EFFECTS OF LOCOWEED (OXYTROPIS-SERICEA) ON GROWTH, REPRODUCTION, AND SERUM HORMONE PROFILES IN YOUNG RAMS, Journal of animal science, 75(12), 1997, pp. 3229-3234
A DESIGNED NONPEPTIDIC RECEPTOR THAT MIMICS THE PHOSPHOCHOLINE BINDING-SITE OF THE MCPC603 ANTIBODY
Authors: MAGRANS JO ORTIZ AR MOLINS MA LEBOUILLE PHP SANCHEZQUESADA J PRADOS P PONS M GAGO F DEMENDOZA J
Citation: Jo. Magrans et al., A DESIGNED NONPEPTIDIC RECEPTOR THAT MIMICS THE PHOSPHOCHOLINE BINDING-SITE OF THE MCPC603 ANTIBODY, Angewandte Chemie, International Edition in English, 35(15), 1996, pp. 1712-1715
MOLECULAR-DYNAMICS SIMULATIONS OF THE BIS-INTERCALATED COMPLEXES OF DITERCALINIUM AND FLEXI-DI WITH THE HEXANUCLEOTIDE D(GCGCGC)(2) - THEORETICAL-ANALYSIS OF THE INTERACTION AND RATIONALE FOR THE SEQUENCE BINDING-SPECIFICITY
Authors: DEPASCUALTERESA B GALLEGO J ORTIZ AR GAGO F
Citation: B. Depascualteresa et al., MOLECULAR-DYNAMICS SIMULATIONS OF THE BIS-INTERCALATED COMPLEXES OF DITERCALINIUM AND FLEXI-DI WITH THE HEXANUCLEOTIDE D(GCGCGC)(2) - THEORETICAL-ANALYSIS OF THE INTERACTION AND RATIONALE FOR THE SEQUENCE BINDING-SPECIFICITY, Journal of medicinal chemistry, 39(24), 1996, pp. 4810-4824
PREDICTION OF DRUG-BINDING AFFINITIES BY COMPARATIVE BINDING-ENERGY ANALYSIS
Authors: ORTIZ AR PISABARRO MT GAGO F WADE RC
Citation: Ar. Ortiz et al., PREDICTION OF DRUG-BINDING AFFINITIES BY COMPARATIVE BINDING-ENERGY ANALYSIS, Journal of medicinal chemistry, 38(14), 1995, pp. 2681-2691
HOMOLOGY MODELING OF THE ABL-SH3 DOMAIN
Authors: PISABARRO MT ORTIZ AR SERRANO L WADE RC
Citation: Mt. Pisabarro et al., HOMOLOGY MODELING OF THE ABL-SH3 DOMAIN, Proteins, 20(3), 1994, pp. 203-215
THERAPEUTIC EFFECTS OF IOR-T1 (ANTI CD6) MURINE MONOCLONAL-ANTIBODY IN PATIENTS WITH T-CELL LYMPHOMAS
Authors: GARCIA CA FAXAS ME VALDES H ORTIZ AR BARROSO MC OSORIO LM ORDONES C EXPOSITO G SAGARO B PARDO A CHONG A
Citation: Ca. Garcia et al., THERAPEUTIC EFFECTS OF IOR-T1 (ANTI CD6) MURINE MONOCLONAL-ANTIBODY IN PATIENTS WITH T-CELL LYMPHOMAS, Journal of cellular biochemistry, 1994, pp. 106-106
MOLECULAR MODELING OF THE INTERACTION OF POLYPROLINE-BASED PEPTIDES WITH THE ABL-SH3 DOMAIN - RATIONAL MODIFICATION OF THE INTERACTION
Authors: PISABARRO MT ORTIZ AR VIGUERA AR GAGO F SERRANO L
Citation: Mt. Pisabarro et al., MOLECULAR MODELING OF THE INTERACTION OF POLYPROLINE-BASED PEPTIDES WITH THE ABL-SH3 DOMAIN - RATIONAL MODIFICATION OF THE INTERACTION, Protein engineering, 7(12), 1994, pp. 1455-1462
RATIONAL MODIFICATION OF HUMAN SYNOVIAL-FLUID PHOSPHOLIPASE A(2) INHIBITORS
Authors: PISABARRO MT ORTIZ AR PALOMER A CABRE F GARCIA L WADE RC GAGO F MAULEON D CARGANICO G
Citation: Mt. Pisabarro et al., RATIONAL MODIFICATION OF HUMAN SYNOVIAL-FLUID PHOSPHOLIPASE A(2) INHIBITORS, Journal of medicinal chemistry, 37(3), 1994, pp. 337-341
NEW 3-(2'-BENZIMIDAZOLYL)IMIDAZO[1,2-A]PYRIDINIUM MESOMERIC BETAINES - SYNTHESIS AND STRUCTURE
Authors: MINGUEZ JM GANDASEGUI T VAQUERO JJ ALVAREZBUILLA J GARCIANAVIO JL GAGO F ORTIZ AR GOMEZSAL P TORRES R RODRIGO MM
Citation: Jm. Minguez et al., NEW 3-(2'-BENZIMIDAZOLYL)IMIDAZO[1,2-A]PYRIDINIUM MESOMERIC BETAINES - SYNTHESIS AND STRUCTURE, Journal of organic chemistry, 58(22), 1993, pp. 6030-6037
MOLECULAR-MODEL OF THE INTERACTION OF BEE VENOM PHOSPHOLIPASE-A2 WITHMANOALIDE
Authors: ORTIZ AR PISABARRO MT GAGO F
Citation: Ar. Ortiz et al., MOLECULAR-MODEL OF THE INTERACTION OF BEE VENOM PHOSPHOLIPASE-A2 WITHMANOALIDE, Journal of medicinal chemistry, 36(13), 1993, pp. 1866-1879
A MOLECULAR-DYNAMICS STUDY OF THE BIS-INTERCALATION COMPLEXES OF ECHINOMYCIN WITH D(ACGT)2 AND D(TCGA)2 - RATIONALE FOR SEQUENCE-SPECIFIC HOOGSTEEN BASE-PAIRING
Authors: GALLEGO J ORTIZ AR GAGO F
Citation: J. Gallego et al., A MOLECULAR-DYNAMICS STUDY OF THE BIS-INTERCALATION COMPLEXES OF ECHINOMYCIN WITH D(ACGT)2 AND D(TCGA)2 - RATIONALE FOR SEQUENCE-SPECIFIC HOOGSTEEN BASE-PAIRING, Journal of medicinal chemistry, 36(11), 1993, pp. 1548-1561
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