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Results: 1-25/61
Authors:
KOLINSKI A
JAROSZEWSKI L
ROTKIEWICZ P
SKOLNICK J
Citation: A. Kolinski et al., AN EFFICIENT MONTE-CARLO MODEL OF PROTEIN CHAINS - MODELING THE SHORT-RANGE CORRELATIONS BETWEEN SIDE-GROUP CENTERS OF MASS, JOURNAL OF PHYSICAL CHEMISTRY B, 102(23), 1998, pp. 4628-4637
Authors:
REVA BA
FINKELSTEIN AV
SKOLNICK J
Citation: Ba. Reva et al., WHAT IS THE PROBABILITY OF A CHANCE PREDICTION OF A PROTEIN-STRUCTUREWITH AN RMSD OF 6 ANGSTROM, Folding & design, 3(2), 1998, pp. 141-147
Authors:
MILIK M
SAUER D
BRUNMARK AP
YUAN LL
VITIELLO A
JACKSON MR
PETERSON PA
SKOLNICK J
GLASS CA
Citation: M. Milik et al., APPLICATION OF AN ARTIFICIAL NEURAL-NETWORK TO PREDICT SPECIFIC CLASS-I MHC BINDING PEPTIDE SEQUENCES, Nature biotechnology, 16(8), 1998, pp. 753-756
Authors:
REVA BA
RYKUNOV DS
FINKELSTEIN AV
SKOLNICK J
Citation: Ba. Reva et al., OPTIMIZATION OF PROTEIN-STRUCTURE ON LATTICES USING A SELF-CONSISTENT-FIELD APPROACH, Journal of computational biology, 5(3), 1998, pp. 531-538
Authors:
ZHANG L
SKOLNICK J
Citation: L. Zhang et J. Skolnick, WHAT SHOULD THE Z-SCORE OF NATIVE PROTEIN STRUCTURES BE, Protein science, 7(5), 1998, pp. 1201-1207
Authors:
ZHANG L
SKOLNICK J
Citation: L. Zhang et J. Skolnick, HOW DO POTENTIALS DERIVED FROM STRUCTURAL DATABASES RELATE TO TRUE POTENTIALS, Protein science, 7(1), 1998, pp. 112-122
Authors:
KOLINSKI A
SKOLNICK J
Citation: A. Kolinski et J. Skolnick, ASSEMBLY OF PROTEIN-STRUCTURE FROM SPARSE EXPERIMENTAL-DATA - AN EFFICIENT MONTE-CARLO MODEL, Proteins, 32(4), 1998, pp. 475-494
Authors:
ORTIZ AR
KOLINSKI A
SKOLNICK J
Citation: Ar. Ortiz et al., TERTIARY STRUCTURE PREDICTION OF THE KIX DOMAIN OF CBP USING MONTE-CARLO SIMULATIONS DRIVEN BY RESTRAINTS DERIVED FROM MULTIPLE SEQUENCE ALIGNMENTS, Proteins, 30(3), 1998, pp. 287-294
Authors:
SKOLNICK J
KOLINSKI A
ORTIZ AR
Citation: J. Skolnick et al., REDUCED PROTEIN MODELS AND THEIR APPLICATION TO THE PROTEIN-FOLDING PROBLEM, Journal of biomolecular structure & dynamics, 16(2), 1998, pp. 381-396
Authors:
ORTIZ AR
KOLINSKI A
SKOLNICK J
Citation: Ar. Ortiz et al., NATIVE-LIKE TOPOLOGY ASSEMBLY OF SMALL PROTEINS USING PREDICTED RESTRAINTS IN MONTE-CARLO FOLDING SIMULATIONS, Proceedings of the National Academy of Sciences of the United Statesof America, 95(3), 1998, pp. 1020-1025
Authors:
KEASAR C
TOBI D
ELBER R
SKOLNICK J
Citation: C. Keasar et al., COUPLING THE FOLDING OF HOMOLOGOUS PROTEINS, Proceedings of the National Academy of Sciences of the United Statesof America, 95(11), 1998, pp. 5880-5883
Authors:
FETROW JS
GODZIK A
SKOLNICK J
Citation: Js. Fetrow et al., FUNCTIONAL-ANALYSIS OF THE ESCHERICHIA-COLI GENOME USING THE SEQUENCE-TO-STRUCTURE-TO-FUNCTION PARADIGM - IDENTIFICATION OF PROTEINS EXHIBITING THE GLUTAREDOXIN THIOREDOXIN DISULFIDE OXIDOREDUCTASE ACTIVITY/, Journal of Molecular Biology, 282(4), 1998, pp. 703-711
Authors:
FETROW JS
SKOLNICK J
Citation: Js. Fetrow et J. Skolnick, METHOD FOR PREDICTION OF PROTEIN FUNCTION FROM SEQUENCE USING THE SEQUENCE-TO-STRUCTURE-TO-FUNCTION PARADIGM WITH APPLICATION TO GLUTAREDOXINS THIOREDOXINS AND T-1 RIBONUCLEASES/, Journal of Molecular Biology, 281(5), 1998, pp. 949-968
Authors:
ORTIZ AR
KOLINSKI A
SKOLNICK J
Citation: Ar. Ortiz et al., FOLD ASSEMBLY OF SMALL PROTEINS USING MONTE-CARLO SIMULATIONS DRIVEN BY RESTRAINTS DERIVED FROM MULTIPLE SEQUENCE ALIGNMENTS, Journal of Molecular Biology, 277(2), 1998, pp. 419-448
Authors:
KOLINSKI A
GALAZKA W
SKOLNICK J
Citation: A. Kolinski et al., MONTE-CARLO STUDIES OF THE THERMODYNAMICS AND KINETICS OF REDUCED PROTEIN MODELS - APPLICATION TO SMALL HELICAL, BETA-PROTEIN, AND ALPHA BETA-PROTEIN/, The Journal of chemical physics, 108(6), 1998, pp. 2608-2617
Authors:
SIKORSKI A
KOLINSKI A
SKOLNICK J
Citation: A. Sikorski et al., COMPUTER-SIMULATIONS OF DE-NOVO DESIGNED HELICAL PROTEINS, Biophysical journal, 75(1), 1998, pp. 92-105
Authors:
KEASAR C
ELBER R
SKOLNICK J
Citation: C. Keasar et al., SIMULTANEOUS AND COUPLED ENERGY OPTIMIZATION OF HOMOLOGOUS PROTEINS -A NEW TOOL FOR STRUCTURE PREDICTION, Folding & design, 2(4), 1997, pp. 247-259
Authors:
SKOLNICK J
JAROSZEWSKI L
KOLINSKI A
GODZIK A
Citation: J. Skolnick et al., DERIVATION AND TESTING OF PAIR POTENTIALS FOR PROTEIN-FOLDING - WHEN IS THE QUASI-CHEMICAL APPROXIMATION CORRECT, Protein science, 6(3), 1997, pp. 676-688
Authors:
HU WP
KOLINSKI A
SKOLNICK J
Citation: Wp. Hu et al., IMPROVED METHOD FOR PREDICTION OF PROTEIN BACKBONE U-TURN POSITIONS AND MAJOR SECONDARY STRUCTURAL ELEMENTS BETWEEN U-TURNS, Proteins, 29(4), 1997, pp. 443-460
Authors:
KOLINSKI A
SKOLNICK J
GODZIK A
HU WP
Citation: A. Kolinski et al., A METHOD FOR THE PREDICTION OF SURFACE U-TURNS AND TRANSGLOBULAR CONNECTIONS IN SMALL PROTEINS, Proteins, 27(2), 1997, pp. 290-308
Authors:
HU WP
GODZIK A
SKOLNICK J
Citation: Wp. Hu et al., SEQUENCE-STRUCTURE SPECIFICITY - HOW DOES AN INVERSE FOLDING APPROACHWORK, Protein engineering, 10(4), 1997, pp. 317-331
Authors:
REVA BA
FINKELSTEIN AV
SANNER M
OLSON AJ
SKOLNICK J
Citation: Ba. Reva et al., RECOGNITION OF PROTEIN-STRUCTURE ON COARSE LATTICES WITH RESIDUE-RESIDUE ENERGY FUNCTIONS, Protein engineering, 10(10), 1997, pp. 1123-1130
Authors:
MILIK M
KOLINSKI A
SKOLNICK J
Citation: M. Milik et al., ALGORITHM FOR RAPID RECONSTRUCTION OF PROTEIN BACKBONE FROM ALPHA-CARBON COORDINATES, Journal of computational chemistry, 18(1), 1997, pp. 80-85
Authors:
SKOLNICK J
KOLINSKI A
ORTIZ AR
Citation: J. Skolnick et al., MONSSTER - A METHOD FOR FOLDING GLOBULAR-PROTEINS WITH A SMALL NUMBEROF DISTANCE RESTRAINTS, Journal of Molecular Biology, 265(2), 1997, pp. 217-241
Authors:
KOLINSKI A
SKOLNICK J
Citation: A. Kolinski et J. Skolnick, DETERMINANTS OF SECONDARY STRUCTURE OF POLYPEPTIDE-CHAINS - INTERPLAYBETWEEN SHORT-RANGE AND BURIAL INTERACTIONS, The Journal of chemical physics, 107(3), 1997, pp. 953-964