Ra. Shaw et al., TURNS IN SMALL CYCLIC-PEPTIDES - CAN INFRARED-SPECTROSCOPY DETECT ANDDISCRIMINATE AMONGST THEM, Journal of molecular structure, 324(1-2), 1994, pp. 143-150
Infrared spectra are reported in the amide I absorption region for som
e cyclic peptides of the general formula cyclo[epsilon-Aca-Pro-Xxx] (e
psilon-Aca = epsilon-aminocaproyl; Xxx = Ala, Thr(OBz)) and the corres
ponding ''dimers'' cyclo[epsilon-Aca-Pro-Xxx-epsilon-Aca-Pro-Xxx] diss
olved in D2O and acetonitrile. The acetonitrile solution spectra are v
ery different from those measured in D2O. In particular, the D2O solut
ion spectra exhibit amide I absorptions at exceptionally low frequenci
es (1595-1600 cm-1). The infrared spectra are interpreted as indicatin
g an unusual D2O solution structure involving three-centered hydrogen
bonding to the Aca carbonyl group, two amide protons interacting with
the C=O group to simultaneously close both a gamma-turn and a beta-tur
n. The acetonitrile solution spectra are interpreted as reflecting hyd
rogen-bonding characteristics of a beta-turn, with certain compounds a
lso showing absorptions that suggest the presence of other hydrogen-bo
nded (gamma-turn) conformers.