E. Ferrer et al., PREPARATION AND PROPERTIES OF OLIGODEOXYNUCLEOTIDES CONTAINING 5-IODOURACIL AND 5-BROMO-CYTOSINE AND 5-IODOCYTOSINE, Bioconjugate chemistry, 8(5), 1997, pp. 757-761
The behavior of oligonucleotides containing 5-iodouracil, 5-bromocytid
ine, and 5-iodocytidine in concentrated ammonia is described. 5-Aminou
racil and 5-aminocytidine are obtained as side products when deprotect
ion is performed at 60 degrees C. Small amounts, if any, of side produ
cts are obtained when ammonia deprotection is performed at room temper
ature. The base-pairing properties of these 5-halopyrimidines includin
g triple helix are described.