Zymomonas mobilis CP4(pZB5) is a recombinant bacterium that can produc
e ethanol from both xylose and glucose. The ethanol-producing efficien
cy of this organism is substantially impeded by toxic substances prese
nt in pretreated hydrolyzates or solid biomass substrates. Acetic acid
and furfural (a pentose degradation product) are highly toxic to this
organism at levels envisioned for a pretreated-hardwood liquid hydrol
yzate. in addition, lignin degradation products and 5-hydroxymethylfur
fural (a hexose degradation product) have a moderately toxic effect on
the organism. Of the compounds studied, organic acids and aldehydes w
ere found to be more inhibitory than lignin acids or the one alkaloid
studied. Acetone:water and methanol extracts of solid biomass samples
from red oak, white oak, and yellow poplar are toxic to Zymomonas cell
growth and ethanol production, with the extracts from white oak being
the most toxic.