SEQUENCE VARIATION OF THE RDNA ITS REGIONS WITHIN AND BETWEEN ANASTOMOSIS GROUPS IN RHIZOCTONIA-SOLANI

Citation
S. Kuninaga et al., SEQUENCE VARIATION OF THE RDNA ITS REGIONS WITHIN AND BETWEEN ANASTOMOSIS GROUPS IN RHIZOCTONIA-SOLANI, Current genetics, 32(3), 1997, pp. 237-243
Citations number
30
Categorie Soggetti
Genetics & Heredity
Journal title
ISSN journal
01728083
Volume
32
Issue
3
Year of publication
1997
Pages
237 - 243
Database
ISI
SICI code
0172-8083(1997)32:3<237:SVOTRI>2.0.ZU;2-2
Abstract
Sequence analysis of the rDNA region containing the internal transcrib ed spacer (ITS) regions and the 5.8s rDNA coding sequence was used to evaluate the genetic diversity of 45 isolates within and between anast omosis groups (AGs) in Rhizoctonin solani. The 5.8s rDNA sequence was completely conserved across all the AGs examined, whereas the ITS rDNA sequence was found to be highly variable among isolates. The sequence homology in the ITS regions was above 96% for isolates of the same su bgroup, 66-100% for isolates of different subgroups within an AG, and 55-96% for isolates of different AGs. In neighbor-joining trees based on distances derived from ITS-5.8s rDNA sequences, subgroups IA, IB an d IC within AG-1 and subgroups HG-I and HG-II within AG-4 were placed on statistically significant branches as assessed by bootstrap analysi s. These results suggest that sequence analysis of ITS rDNA regions of R. solani may be a valuable tool for identifying AG subgroups of biol ogical significance.