The histidine triad (HIT) protein family is among the most ubiquitous
and highly conserved in nature, but a biological activity has not yet
been identified for any member of the HIT family. Fragile histidine tr
iad protein (FHIT) and protein kinase C interacting protein (PKCI) wer
e used in a structure-based approach to elucidate characteristics of i
n vivo ligands and reactions. Crystallographic structures of ape, subs
trate analog, pentacovalent transition-state analog, and product slate
s of both enzymes reveal a catalytic mechanism and define substrate ch
aracteristics required for catalysis, thus unifying the HIT family as
nucleotidyl hydrolases, transferases, or both. The approach described
here may be useful in identifying structure-function relations between
protein families identified through genomics.