Branchio-oto-renal (BOR) syndrome is an autosomal dominant disease cha
racterized by varying combinations of branchial, otic and renal anomal
ies. By positional cloning, a candidate gene, EYA1, homologous to the
drosophila eyes absent gene, has recently been identified at 8q13.3 an
d shown to underlie this syndrome. The name branchio-oto (BO) syndrome
has been used to describe a similar combination of branchial and otic
anomalies, without the association of renal anomalies. Whether BOR an
d BO syndromes involve the same gene was unknown. To address this ques
tion, we analyzed two large independent families for which each of the
8 affected members present exclusively with BO syndrome. In both fami
lies, linkage analysis mapped the causative gene to the same chromosom
al region as EYA1. A search for mutations in 9 of the EYA1 coding exon
s identified a 2-bp insertion segregating in one family and an X-bp de
letion segregating in the other. These results demonstrate that EYA1 a
lso underlies BO syndrome, and that BOR and BO syndromes are allelic d
efects of this gene.