THE LAST PHASE OF THE REPROTONATION SWITCH IN BACTERIORHODOPSIN - THETRANSITION BETWEEN THE M-TYPE AND THE N-TYPE PROTEIN CONFORMATION DEPENDS ON HYDRATION
H. Kamikubo et al., THE LAST PHASE OF THE REPROTONATION SWITCH IN BACTERIORHODOPSIN - THETRANSITION BETWEEN THE M-TYPE AND THE N-TYPE PROTEIN CONFORMATION DEPENDS ON HYDRATION, Biochemistry, 36(40), 1997, pp. 12282-12287
In order to elucidate the mechanism of the reprotonation switch of bac
teriorhodopsin, the protein conformation of the M intermediate of the
D96N mutant was examined at various hydration conditions by X-ray diff
raction and FTIR spectroscopy. We observed two distinct protein confor
mations at different levels of hydration. One is like in the N photoin
termediate, although in this case with an unprotonated Schiff base. It
is stabilized in highly hydrated samples. The other is a protein conf
ormation identical to that in the normal M intermediate of wild-type b
acteriorhodopsin, which is stabilized in partially dehydrated samples.
The hydration dependence of the structural transition between the M-t
ype and the N-type conformations suggests that there is a change in th
e binding of water at the cytoplasmic surface. Thus, more water molecu
les bind in the N-type structure than in the M-type. This is consisten
t with the idea that the conformational change from the M-type to the
N-type corresponds to the opening of the proton channel to the cytopla
smic surface by tilt of the cytoplasmic end of helix F, and that this
is required for proton transfer from Asp-96 to the retinal Schiff base
.