St. Wlodek et al., MOLECULAR-DYNAMICS OF ACETYLCHOLINESTERASE DIMER COMPLEXED WITH TACRINE, Journal of the American Chemical Society, 119(40), 1997, pp. 9513-9522
We have studied the dynamic properties of acetylcholinesterase dimer f
rom Torpedo californica liganded with tacrine (AChE-THA) in solution u
sing molecular dynamics. The simulation reveals fluctuations in the wi
dth of the primary channel to the active site that are large enough to
admit substrates. Alternative entries to the active site through the
side walls of the gorge have been detected in a number of structures.
This suggests that transport of solvent molecules participating in cat
alysis can occur across the porous wall, contributing to the efficienc
y of the enzyme.