INVOLVEMENT OF LASER PHOTO-CIDNP(CHEMICALLY INDUCED DYNAMIC NUCLEAR POLARIZATION)-REACTIVE AMINO-ACID SIDE-CHAINS IN LIGAND-BINDING BY GALACTOSIDE-SPECIFIC LECTINS IN SOLUTION
Hc. Siebert et al., INVOLVEMENT OF LASER PHOTO-CIDNP(CHEMICALLY INDUCED DYNAMIC NUCLEAR POLARIZATION)-REACTIVE AMINO-ACID SIDE-CHAINS IN LIGAND-BINDING BY GALACTOSIDE-SPECIFIC LECTINS IN SOLUTION, European journal of biochemistry, 249(1), 1997, pp. 27-38
For proteins in solution the validity of certain crystallographic para
meters can be ascertained by a combination of molecular-dynamics (MD)
simulations and NMR spectroscopy. Using the laser photo-CIDNP (chemica
lly induced dynamic nuclear polarization) technique as a measure for s
urface accessibility of histidine, tyrosine and tryptophan, the spectr
a of bovine galectin-1 and Erythrina corallodendron lectin (EcorL) are
readily reconcilable with the crystallographic data for these two pro
teins. The results emphasise the role of Trp68/Trp69 for carbohydrate
binding in bovine galectin-1/chicken galectins and of Trp194 in murine
galectin-3. This feature derived from the crystal structure of bovine
galectin-1 is maintained in solution for the prototype human homologu
e, two avian galectins and the chimera-type murine galectin-3, as the
spectra corroborate the CIDNP-inferable spatial parameters of the four
calculated models for binding-site architecture. In EcorL, Tyr106/Tyr
108 are constituents of the extended combining pocket, which can be sh
ielded in solution by ligand presence. Discrepancies between results f
rom modelling and CIDNP measurements concern primarily the lack of rea
ctivity of histidine residues for human and avian prototype galectins
and of Tyr82/Tyr229 of the plant lectin. Site-directed mutagenesis of
EcorL is assumed to provide information on the role of a certain resid
ue for functional aspects, When single-site mutants of EcorL ([Ala106]
EcorL [Ala108]EcorL, [Ala229]EcorL) were subjected to molecular-dynami
cs (MD) simulations, the apparent surface accessibilities even of spat
ially separated amino acid side chains could non-uniformly be affected
. This conclusion is supported by the assessment of the spectra for th
e mutant proteins. On the basis of these CIDNP-results modelling of th
e binding-site architecture of the lectin indicates the occurrence of
notable alterations in the orientation of Tyr106/Tyr108 phenyl rings.
The implied potential effect of single-site mutations on conformationa
l features of a protein will deserve attention for the interpretation
of studies comparing wild-type and mutant proteins.