EFFICIENT TREATMENT OF OUT-OF-PLANE BEND AND IMPROPER TORSION INTERACTIONS IN MM2, MM3, AND MM4 MOLECULAR MECHANICS CALCULATIONS

Citation
Re. Tuzun et al., EFFICIENT TREATMENT OF OUT-OF-PLANE BEND AND IMPROPER TORSION INTERACTIONS IN MM2, MM3, AND MM4 MOLECULAR MECHANICS CALCULATIONS, Journal of computational chemistry, 18(14), 1997, pp. 1804-1811
Citations number
14
Categorie Soggetti
Chemistry
ISSN journal
01928651
Volume
18
Issue
14
Year of publication
1997
Pages
1804 - 1811
Database
ISI
SICI code
0192-8651(1997)18:14<1804:ETOOBA>2.0.ZU;2-Y
Abstract
Simple and very efficient formulas are presented for four-body out-of- plane bend (used in MM2 and MM3 force fields) and improper torsion (us ed in the MM4 force field) internal coordinates and their first and se cond derivatives. The use of a small set of bend and stretch. intermed iates allows for order of magnitude decreases in calculation time for potential energies and their first and second derivatives, which are r equired in molecular mechanics calculations. The formulas are eminentl y suitable for use in molecular simulations of systems with complicate d bond networks. (C) 1997 John Wiley & Sons, Inc.