A new procedure was developed to purify leghemoglobins (Lbs) from Glyc
ine max L. (Merr). root nodules. This procedure resulted in the purifi
cation of a hemoprotein fraction, Lbam. Lbam as detected by ion-exchan
ge-HPLC was found in nodule extracts prepared in the presence of pepti
dase inhibitors, and was unstable in acidic solutions. Acidic conditio
ns also enhanced proteolysis of Lba by a nodule fraction enriched in p
eptidases as observed using a denaturing peptide gel developed for thi
s purpose. In contrast, there was little degradation of Lba by endogen
ous peptidases at pH 8.0. We incorporated these observations into the
purification protocol as follows. (1) nodule extracts were first chrom
atographed on hydroxylapatite at pH 6.8. Greater than 98% of the pepti
dases bound to the column and the Lbs were recovered in the wash fract
ion; (2) subsequent ion-exchange chromatography of the wash fraction a
t pH 8.0 yielded several fractions related to Lba, including Lbam; and
(3) The crude Lbam fraction was resolved into four distinct protein b
ands by isoelectric focusing using a new buffer system and gel formula
tion. One of these bands exhibited a pI value identical to that of Lba
, whereas the other three proteins displayed more acidic pI values of
4.91, 4.87 and 4.85, respectively. All of these purified Lbam proteins
had molecular weights indistinguishable from Lba,similar amino acid c
ompositions and possessed a sequence identical to that of Lba in the f
irst 15 residues from the amino-terminal end.