A polygalacturonase inhibitor protein (PGIP) was characterized from to
mato fruit. Differential glycosylation of a single polypeptide account
ed for heterogeneity in concanavalin A binding and in molecular mass.
Tomato PGIP had a native molecular mass of 35 to 41 kDa, a native isoe
lectric point of 9.0, and a chemically deglycosylated molecular mass o
f 34 kDa, suggesting shared structural similarities with pear fruit PG
IP. When purified PGIPs from pear and tomato were compared, tomato PGI
P was approximately twenty-fold less effective an inhibitor of polygal
acturonase activity isolated from cultures of Botrytis cinerea. Based
on partial amino acid sequence, polymerase chain reaction products and
genomic clones were isolated and used to demonstrate the presence of
PGIP mRNA in both immature and ripening fruit as well as cell suspensi
on cultures. Nucleotide sequence analysis indicates that the gene, uni
nterrupted by introns, encodes a predicted 36.5 kDa polypeptide contai
ning amino acid sequences determined from the purified protein and sha
ring 68% and 50% amino acid sequence identity with pear and bean PGIPs
, respectively. Analysis of the PGIP sequences also revealed that they
belong to a class of proteins which contain leucine-rich tandem repea
ts. Because these sequence domains have been associated with protein-p
rotein interactions, it is possible that they contribute to the intera
ction between PGIP and fungal polygalacturonases.