We have cloned cDNAs for the shaker potassium channel gene from the sp
iny lobster Panulirus interruptus. As previously found in Drosophila,
there is alternative splicing at the 5' and 3' ends of the coding regi
on. However, in Panulirus shaker, alternative splicing also occurs wit
hin the pore-forming region of the protein. Three different splice var
iants were found within the P region, two of which bestow unique elect
rophysiological characteristics to channel function. Pore I and pore I
I variants differ in voltage dependence for activation, kinetics of in
activation, current rectification, and drug resistance. The pore 0 var
iant lacks a P region exon and does not produce a functional channel.
This is the first example of alternative splicing within the pore-form
ing region of a voltage-dependent ion channel. We used a recently iden
tified potassium channel blocker, kappa-conotoxin PVIIA, to study the
physiological role of the two pore forms. The toxin selectively blocke
d one pore form, whereas the other form, heteromers between the two po
re forms, and Panulirus shal were not blocked. When it was tested in t
he Panulirus stomatogastric ganglion, the toxin produced no effects on
transient K+ currents or synaptic transmission between neurons.