Km. Kerr et L. Hedstrom, THE ROLES OF CONSERVED CARBOXYLATE RESIDUES IN IMP DEHYDROGENASE AND IDENTIFICATION OF A TRANSITION-STATE ANALOG, Biochemistry, 36(43), 1997, pp. 13365-13373
IMP dehydrogenase (IMPDH) catalyzes the oxidation of IMP to XMP with t
he concomitant reduction of NAD(+); the enzyme is activated by K+. Thi
s reaction is the rate-limiting step in de novo guanine nucleotide bio
synthesis. In order to identify functionally important residues in IMP
DH, including those involved in substrate and K+ binding, we have muta
ted 11 conserved Asp and Glu residues to Ala in Escherichia coli IMPDH
. The values of k(cat), K-m, and K-i for GMP, XMP, mizoribine 5'-monop
hosphate (MMP), and beta-methylene-tiazofurin adenine dinucleotide (TA
D) were determined. Five of these mutations caused a significant chang
e (greater than or equal to 10-fold) in one of these parameters. The A
sp248 --> Ala mutation caused 100-fold decrease in the value of k(cat)
and a 25-fold increase in the value of K-ii for TAD; these observatio
ns suggest that Asp248 is in the NAD(+) binding site. The Asp338 --> A
la mutation caused a 600-fold decrease in the value of k(cat), but onl
y a 5-10-fold increase in the values of K-m for IMP and K-is for IMP a
nalogs, suggesting that Asp338 may be involved in acid-base catalysis
as well as IMP binding. The remaining three residues, Asp13, Asp50, an
d Glu469, appear to be involved in Kf activation; these residues may b
e ligands at one or more K+ binding sites. Interestingly, changes in t
he values of K-i for MMP correlate with changes in k(cat)/KmKm of IMPD
H, while no such correlation is observed for GMP, XMP, and TAD. This o
bservation indicates that MMP is a transition state analog for the IMP
DH reaction.