A tryptic mapping procedure has been developed for a recombinant hemog
lobin (rHb1.1) using an immobilized trypsin cartridge. Apohemoglobin i
s passed through the trypsin cartridge and the products of the digesti
on are captured directly onto an in-line C18 reversed-phase column. Th
e peptides are then separated using a gradient elution. This new proce
dure is rapid and reproducible and can be fully automated. The total t
ime of analysis is less than 2 h. The mapping of apohemoglobins produc
ed an unexpected isomerization of two peptides: beta 8,9 (K-66-K-82) a
nd alpha 8,9 (K-61-K-90). It appears that the isomerization may occur
through transpeptidation followed by proteolysis at a newly generated
site next to the site of ligation. This mapping procedure can be a use
ful tool for research and routine analysis of proteins. (C) 1997 Acade
mic Press.