Transporter-associated with antigen processing (TAP1 and TAP2) gene pr
oducts are involved in the transport/processing of self-peptides from
cytosol into endoplasmic reticulum (ER). In ER, these peptides associa
te with human leucocyte antigen (HLA)-class I molecules for further pr
esentation at cell surface. Deficient processing and/or presentation c
ould lead to altered self-tolerance resulting in autoimmunity. We stud
ied TAP1 and TAP2 genes and genotypes frequencies in 49 controls and i
n 101 patients with primary IgA nephritis (IgAN). The patients were di
vided into two groups: 45 patients with end-stage renal failure (ESRF)
and 56 patients with normal kidney function (NKF). DNA was extracted
from peripheral blood and amplified by double amplification refractory
mutation system-polymerase chain reaction (ARMS-PCR) using appropriat
e primers for the two point-mutations on TAP1 genes and for the three
point-mutations on TAP2 genes, which are the basis of TAP polymorphism
We have found a weak association between TAP2-p379-VAL/ILE genotype a
nd total-IgAN (24% vs 12% in controls; P = 0.05). However, the analysi
s of a subgroup of IgAN patients bearing HLA-B35 antigen, a former poo
r prognosis marker, disclosed an association between the TAP2-1993Ntd-
Cruanine variant (coding for TAP2-p665-ALA): 31% in B35-ESRF-IgAN subg
roup vs 6% in controls (P = 0.04) and 13% in B35-NKF-IgAN (P = NS). Th
e complexity of immunogenetic studies in IgAN is further increased by
the existence of two opposite pathological subgroups: normal glomerula
r basement membrane (GEM) thickness us thin-GEM. There was a complex r
elation in IgAN between this TAP2 variant and the following parameters
: ESRF, HLA-B35, and normal-GBM. Further investigations are therefore
needed.