Non-Mendelian inheritance and heterozygote deficiency were observed wi
thin the International Bovine Reference Panel (IBRP) when genotyped fo
r AGC trinucleotide microsatellite ARO23. Chi square analysis showed a
significant difference between the observed and predicted heterozygos
ity among 37 unrelated individuals. PCR reactions using an alternative
primer designed to avoid a putative mismatch resulted in the appearan
ce of an additional allele with a frequency of 0.30 and the restoratio
n of Mendelian inheritance. Sequence analysis of this allele showed a
cytosine insertion 2 bp from the 3' end of the original priming site c
ausing the failure of allele amplification. The presence of a segregat
ing null allele may be suspected when heterozygote deficiency is obser
ved.