S. Hisada et al., EXPRESSED SEQUENCE TAGS OF CITRUS-FRUIT DURING RAPID CELL-DEVELOPMENTPHASE, Journal of the American Society for Horticultural Science, 122(6), 1997, pp. 808-812
A cDNA library was constructed from satsuma mandarin (Citrus unshiu Ma
rc.) fruit tissues during the rapid cell enlargement phase. A total of
950 individual cDNA clones was partially sequenced and compared with
GenBank databases for characterizing the gene repertoire expressed dur
ing this developmental phase. Among these, 426 cDNA clones (44.8%) sho
wed sequence identity with previously characterized genes with optimiz
ed (OPT) scores of greater than or equal to 200, while 524 clones (55.
2%) resulted in low OPT scores (<200) and did not show any significant
sequence identity with previously published genes. Based on nucleotid
e sequence, most clones with OPT scores of greater than or equal to 20
0 were assumed to be transcription-, translation-, cell-wall-metabolis
m-, and stress-response-related genes. Other clones showed homology wi
th published sequences related to housekeeping and stress-response-rel
ated genes, including metallothionein-like proteins, late-embryogenesi
s-abundant (LEA) proteins, and heat-shock proteins. These results sugg
ested that Citrus fruit during rapid cell enlargement were metabolical
ly active and expanding in response to biotic and abiotic stress. For
clones with low nucleotide sequence homology, the recurrence was evalu
ated by aligning nucleotide sequences of each clone and generating con
tig maps. Expressed sequence tags (ESTs) of 162 clones with OPT scores
<200 have not been reported for any other organism. Collectively, ran
domly sequenced cDNA clones described in this study provided informati
on on types of genes expressed during the rapid cell enlargement phase
in Citrus fruit. These genes should be used as candidates for Citrus
genome mapping projects.