Background: Biologically compatible fluorescent protein probes, partic
ularly the self-assembling green fluorescent protein (GFP) from the je
llyfish Aequorea victoria, have revolutionized research in cell, molec
ular and developmental biology because they allow visualization of bio
chemical events in living cells. Additional fluorescent proteins that
could be reconstituted in vivo while extending the useful wavelength r
ange towards the orange and red regions of the light spectrum would in
crease the range of applications currently available with fluorescent
protein probes. Results: Intensely orange fluorescent adducts, which w
e designate phytofluors, are spontaneously formed upon incubation of r
ecombinant plant phytochrome apoproteins with phycoerythrobilin, the l
inear tetrapyrrole precursor of the phycoerythrin chromophore. Phytofl
uors have large molar absorption coefficients, fluorescence quantum yi
elds greater than 0.7, excellent photostability, stability over a wide
range of pH, and can be reconstituted in living plant cells. Conclusi
ons: The phytofluors constitute a new class of fluorophore that can po
tentially be produced upon bilin uptake by any living cell expressing
an apophytochrome cDNA. Mutagenesis of the phytochrome apoprotein and/
or alteration of the linear tetrapyrrole precursor by chemical synthes
is are expected to afford new phytofluors with fluorescence excitation
and emission spectra spanning the visible to near-infrared light spec
trum.