ARTIFICIAL NEURAL-NETWORK IDENTIFICATION OF HETEROTROPHIC MARINE-BACTERIA BASED ON THEIR FATTY-ACID COMPOSITION

Citation
M. Giacomini et al., ARTIFICIAL NEURAL-NETWORK IDENTIFICATION OF HETEROTROPHIC MARINE-BACTERIA BASED ON THEIR FATTY-ACID COMPOSITION, IEEE transactions on biomedical engineering, 44(12), 1997, pp. 1185-1191
Citations number
28
Categorie Soggetti
Engineering, Biomedical
ISSN journal
00189294
Volume
44
Issue
12
Year of publication
1997
Pages
1185 - 1191
Database
ISI
SICI code
0018-9294(1997)44:12<1185:ANIOHM>2.0.ZU;2-J
Abstract
The traditional approach to biochemical identification of marine fresh isolates requires considerably long culture preparation times and lar ge quantities of expensive materials and reagents, and the results are not very reliable. On the other hand, taxonomy tests based on DNA com position, although sensitive and reliable, require long execution time s and high costs. A method is presented for the classification of fatt y-acid profiles, extracted from marine bacteria strains, at genus leve l based on supervised artificial neural networks. The proposed method allows the correct identification of all patterns belonging to the tra ining set and almost all patterns belonging to the test set. Moreover, a quantitative measure of the importance of each fatty acid for bacte rial classification is also achieved. This measure allows the determin ation of a cluster of fatty acids to be controlled with greater care. The results show that the proposed method is reproducible and rapid, s o that it can be routinely used in the marine microbiology laboratory to identify fresh isolates.