L. Escolar et al., METALLOREGULATION IN-VITRO OF THE AEROBACTIN PROMOTER OF ESCHERICHIA-COLI BY THE FUR (FERRIC UPTAKE REGULATION) PROTEIN, Molecular microbiology, 26(4), 1997, pp. 799-808
The mechanism of transcriptional repression of the aerobactin operon o
f Escherichia coli by the Fe2+-responsive Fur (ferric uptake regulatio
n) protein has been investigated. In the presence of a divalent metal,
such as Mn2+, the Fur protein sequentially occupies two defined sites
at the aerobactin promoter region, followed by a looser occupation of
upstream DNA sequences. However, binding to the primary target site s
uffices for the entire repression effect. Comparison of transcription
patterns generated with run-off experiments in the presence and absenc
e of heparin showed that access of the RNA polymerase to the principal
-35/-10 hexamers of the promoter region was fully prevented by Fur-Mn
2+ bound to its primary site. Similarly, promoter-bound RNA polymerase
could not be competed out from the DNA even in the presence of a larg
e Fur-Mn2+ excess, although the repressor could immediately bind its t
arget sequence at the region as soon as RNA polymerase moved away from
the promoter during transcription. The high affinities of either prot
ein for the promoter produce, in practice, a first-come, first-served
effect that helps the system to respond instantly to changes in the ir
on status of the cells.