The gene of a novel chymotrypsin-like serine protease has been cloned
from human pancreas. The chymotrypsin-like enzyme-1 gene is located on
chromosome 16q22.1 in a tight cluster with four unrelated genes. The
gene has seven exons with the signal and activation peptide and the th
ree main catalytic residues forming the active site encoded by separat
e exons. Northern blots of pancreatic mRNA showed a major transcript o
f 1.0 kilobases and a minor transcript of 1.3 kilobases due to alterna
tive polyadenylation. No transcript was found in other tissues. Its pr
esence in pancreatic tissue, duodenal juice, and urine was demonstrate
d with antisera raised against synthetic peptides from the derived ami
no acid sequence of the gene, The peptide sequences were chosen for be
ing most dissimilar to chymotrypsin, and the antisera obtained did not
react with purified human chymotrypsin. The proteolytically active CT
RL-1 has been identified in pancreatic homogenate, duodenal juice, and
urine, and a recombinant CTRL-1 has been characterized. Increased pan
creatic secretion of CTRL-1 was induced by protease inhibitors indicat
ing that the enzyme is secreted from pancreas upon feedback stimulatio
n. Both native and recombinant CTRL-1 displayed chymotrypsin- and elas
tase-2-like activities and hydrolyzed the amide bonds of substrates ha
ving tyrosine, phenylalanine, or leucine residues at the p(1) position
. The enzyme was active over a broad pH range (6.5-9.0), with a maximu
m at pH 8.0-8.5. CTRL-1 was produced as a zymogen of 264 amino acids a
s deduced from the gene sequence, with a sequence identity of 54% with
human chymotrypsin B. The number and location of intron/exon junction
s as well as the sequence similarity to chymotrypsin both at the DNA a
nd protein level and the presence in duodenal juice indicate that this
is a novel digestive enzyme of the chymotrypsin superfamily, albeit o
ne with distinct physiological and biochemical features.