To obtain insight in the process of water permeation through a lipid m
embrane, we performed molecular dynamics simulations on a phospholipid
(DPPC)/water system with atomic detail. Since the actual process of p
ermeation is too slow to be studied directly, we deduced the permeatio
n rate indirectly via computation of the free energy and diffusion rat
e profiles of a water molecule across the bilayer. We conclude that th
e permeation of water through a lipid membrane cannot be described ade
quately by a simple homogeneous solubility-diffusion model. Both the e
xcess free energy and the diffusion rate strongly depend on the positi
on in the membrane, as a result from the inhomogeneous nature of the m
embrane. The calculated excess free energy profile has a shallow slope
and a maximum height of 26 kJ/mol. The diffusion rate is highest in t
he middle of the membrane where the lipid density is low. In the inter
facial region almost all water molecules are bound by the lipid headgr
oups, and the diffusion turns out to be 1 order of magnitude smaller.
The total transport process is essentially determined by the free ener
gy barrier. The rate-limiting step is the permeation through the dense
part of the lipid tails, where the resistance is highest. We found a
permeation rate of 7(+/-3) x 10(-2) cm/s at 350 K, comparable to exper
imental values for DPPC membranes, if corrected for the temperature of
the simulation. Taking the inhomogeneity of the membrane into account
, we define a new ''four-region'' model which seems to be more realist
ic than the ''two-phase'' solubility-diffusion model.