Wk. Denotter et Wj. Briels, THE REACTIVE FLUX METHOD APPLIED TO COMPLEX ISOMERIZATION-REACTIONS -USING THE UNSTABLE NORMAL-MODE AS A REACTION COORDINATE, The Journal of chemical physics, 106(13), 1997, pp. 5494-5508
A basic problem when calculating reaction rates using the reactive flu
x method is the introduction of a reaction coordinate. In this paper w
e show that it is advantageous to define a reaction coordinate by mean
s of the unstable normal mode of the saddle point of the potential ene
rgy surface. This particular choice is made since it yields a high tra
nsmission function. Moreover, the reaction coordinate is calculated vi
a a rapidly converging algorithm, and its derivative, which is needed
in constrained runs, is calculated analytically. Calculations on the t
ransmission coefficient of the isomerization of n-butane are in good a
greement with results published by others. Runs with an isomerizing ca
lix[4]arene in vacuo produce a very high transmission coefficient, as
is the purpose of the reaction coordinate. The same molecule is also s
tudied in chloroform. (C) 1997 American Institute of Physics.