SOLVATION THERMODYNAMICS OF AMINO-ACIDS - ASSESSMENT OF THE ELECTROSTATIC CONTRIBUTION AND FORCE-FIELD DEPENDENCE

Citation
Sb. Dixit et al., SOLVATION THERMODYNAMICS OF AMINO-ACIDS - ASSESSMENT OF THE ELECTROSTATIC CONTRIBUTION AND FORCE-FIELD DEPENDENCE, Journal of the Chemical Society. Faraday transactions, 93(6), 1997, pp. 1105-1113
Citations number
85
Categorie Soggetti
Chemistry Physical","Physics, Atomic, Molecular & Chemical
ISSN journal
09565000
Volume
93
Issue
6
Year of publication
1997
Pages
1105 - 1113
Database
ISI
SICI code
0956-5000(1997)93:6<1105:STOA-A>2.0.ZU;2-Z
Abstract
The free energies of hydration of the 20 amino acids in their zwitteri onic form, their pK(a) shifts and the side-chain free energies of tran sfer have been calculated using the finite difference Poisson-Boltzman n methodology. A comparison of the results obtained with charge and si ze parameters from some popular force fields used in modelling biomole cules is presented. The force fields considered include recent version s of AMBER, CHARMM, CVFF, GROMOS and OPLS, PARSE and an ab initio-deri ved charge set. A general agreement between the theoretical prediction s, emerging from each of the parameter sets, and experiment is discern ible A critique on the current status of theoretical studies on amino acids in solution is also advanced.