Rg. Duggleby, ANALYSIS OF PROGRESS CURVES FOR ENZYME-CATALYZED REACTIONS - APPLICATION TO UNSTABLE ENZYMES, COUPLED REACTIONS AND TRANSIENT-STATE KINETICS, Biochimica et biophysica acta. Protein structure and molecular enzymology, 1205(2), 1994, pp. 268-274
There are several advantages to the use of progress curves to analyze
the kinetic properties of enzymes but most studies still rely on rate
measurements. One of the reasons for this may be that progress curve a
nalysis relies on the enzyme and the reactants being completely stable
under assay conditions. Here a method is described that relaxes this
requirement and allows progress curve analysis to be applied to unstab
le enzymes. The procedure is based on a combination of numerical integ
ration and non-linear regression to fit rate equations to the progress
curve data. The analysis is verified using simulated data and illustr
ated by application to the reaction catalyzed by alkaline phosphatase,
measured in the presence of 10 mM EGTA where it has a half-life of 31
/2 min. The method may also be applied to other experimental systems w
here the development over time reveals important properties but where
an analytical solution of the underlying model is not known. This exte
nsion is illustrated by two systems: the coupled reactions catalyzed b
y pyruvate kinase and lactate dehydrogenase under conditions where bot
h enzymes have similar activity; and the transient-state kinetics of t
he reaction catalyzed by glutamate dehydrogenase.