Mk. Short et al., CONTRIBUTION OF ANTIBODY HEAVY-CHAIN CDR1 TO DIGOXIN BINDING ANALYZEDBY RANDOM MUTAGENESIS OF PHAGE-DISPLAYED FAB-26-10, The Journal of biological chemistry, 270(48), 1995, pp. 28541-28550
We constructed a bacteriophage-displayed library containing randomized
mutations at H chain residues 30-35 of the anti-digoxin antibody 26-1
0 Fab to investigate sequence constraints necessary for high affinity
binding in an antibody of known crystal structure. Phage were selected
by panning against digoxin and three C-16-substituted analogues. All
antigen-positive mutants selected using other analogues also bound dig
oxin. Among 73 antigen-positive clones, 26 different nucleotide sequen
ces were found. The majority of Fabs had high affinity for digoxin (K-
alpha 3.4 x 10(9) M(-1)) despite wide sequence diversity, Two mutants
displayed affinities 2- and 4-fold higher than the parental antibody.
Analysis of the statistical distribution of sequences showed that high
est affinity binding occurred with a restricted set of amino acid subs
titutions at positions H33-35. All clones save two retained the parent
al Asn-H35, which contacts hapten and hydrogen bonds to other binding
site residues in the parental structure, Positions H30-32 display rema
rkable diversity, with 10-14 different substitutions for each residue,
consistent with high affinity binding. Thus complementarity can be re
tained and even improved despite diversity in the conformation of the
N-terminal portion of the H-CDR1 loop.