OBSERVATION OF WATER-MEDIATED HELIX-TERMINATING CONFORMATION IN A DEHYDROPHENYLALANINE PEPTIDE - CRYSTAL AND SOLUTION STRUCTURE OF THE OCTAPEPTIDE TA-PHE-VAL-DELTA-PHE-PHE-ALA-VAL-DELTA-PHE-GLY-OME
Kr. Rajashankar et al., OBSERVATION OF WATER-MEDIATED HELIX-TERMINATING CONFORMATION IN A DEHYDROPHENYLALANINE PEPTIDE - CRYSTAL AND SOLUTION STRUCTURE OF THE OCTAPEPTIDE TA-PHE-VAL-DELTA-PHE-PHE-ALA-VAL-DELTA-PHE-GLY-OME, Journal of the American Chemical Society, 117(47), 1995, pp. 11773-11779
We have synthesised and determined the solution conformation and X-ray
crystal structure of the octapeptide Ac-Delta Phe(1)-Val(2)-Delta Phe
(3)-Phe(4)-Ala(5)-Val(6)-Delta Phe(7)-Gly(8)-OCH3 (Delta Phe = alpha,b
eta-dehydrophenylalanine) containing three Delta Phe residues as confo
rmation constraining residues. In the solid state, the peptide folds i
nto (i) an N-terminal (3)10(R)-helical pentapeptide segment, (ii) a mi
ddle non-helical segment, and (iii) a C-terminal incipient (3)10(L)-he
lical segment. The results of H-1 NMR data also suggest that a similar
multiple-turn conformation for the peptide is largely maintained in s
olution. Though the C-terminal helix is incipient, the overall conform
ation of the octapeptide matches well with the conformation of the hai
rpins reported. Comparison of the pi-turn seen in the octapeptide mole
cule with those observed in proteins at the C-terminal end of helixes
shows the structural similarity among them. A water molecule mediates
the 5 --> 2 hydrogen bond in the pi-turn region. This is the first exa
mple of a water-inserted pi-turn in oligopeptides reported so far. Com
parison between the present octapeptide and another (3)10(R)-helical d
ehydro nonapeptide Boc-Val-Delta Phe-Phe-Ala-Phe-Delta Phe-Val-Delta P
he-Gly-OCH3 solved by us recently, demonstrates the possible sequence-
dependent conformational variations in alpha,beta-dehydrophenylalanine
-containing oligopeptides.