In the budding yeast, Saccharomyces cerevisiae, DNA replication initia
tes at specific, discrete chromosomal locations. At each initiation si
te, a single small replication bubble is generated, which subsequently
expands at Y-like replication forks. We wanted to know whether other
eukaryotic organisms utilize similar initiation mechanisms. For this p
urpose, replication intermediates (RIs) from three different organisms
(Schizosaccharomyces pombe, Chinese hamster and human) were mixed ind
ividually with RIs from S. cerevisiae and then subjected to two-dimens
ional (2D) gel electrophoresis under conditions known to resolve molec
ules having different structures. All of the RIs detected by the hybri
dization probes we used for each organism migrated nearly identically
to specific RIs of similar size from S. cerevisiae, implying that the
detected RIs from all the studied organisms have very similar structur
es and may therefore employ the same basic initiation mechanism.