Tj. Lopez et Lr. Maxson, MITOCHONDRIAL-DNA SEQUENCE VARIATION AND GENETIC DIFFERENTIATION AMONG COLUBRINE SNAKES (REPTILIA, COLUBRIDAE, COLUBRINAE), Biochemical systematics and ecology, 23(5), 1995, pp. 487-505
Nucleotide sequence variation in a portion of the mitochondrial 16S ri
bosomal RNA gene was assessed to investigate systematic affinities wit
hin the snake subfamily Colubrinae. A total of 391 base pairs from eac
h of 33 taxa were aligned, with Thamnophis as the outgroup to the Colu
brinae. Data were analyzed using both distance (145 sites) and parsimo
ny (75 sites) algorithms. Analyses were concordant in showing that alt
hough morphologically resembling a ratsnake, the Asian Gonyosoma oxyce
phalum is genetically more similar to the North American racer lineage
that includes Coluber constrictor and Masticophis flagellum than to a
ny ratsnake examined. All other ratsnakes sampled comprise a monophyle
tic group separate from the remaining colubrines. Within this ratsnake
clade, the Nearctic ratsnakes can be distinguished as a monophyletic
group. At least nine separate racer lineages can be identified. With t
hree exceptions, racers from the same geographical region are genetica
lly more similar to one another than to colubrines of other geographic
origin. Finer resolution of phylogenetic affinities among taxa within
this subfamily will require additional sequence data and more extensi
ve sampling of taxa. The relative degree of sequence divergence observ
ed between the tribes (racers and ratsnakes) sampled is consistent wit
h other biochemical estimates of protein divergence, as well as with f
ossil evidence, that suggests a Miocene divergence between the ratsnak
es and other colubrine lineages.