The crystal structures of the flavin adenine dinucleotide (FAD) and fl
avin mononucleotide (FMN) containing isoforms of NADH oxidase from The
rmus thermophilus have been determined by isomorphous and molecular re
placement and refined to 2.3 Angstrom and 1.6 Angstrom resolution with
R-values of 18.5 % and 18.6 % respectively, The structure of the homo
dimeric enzyme consists of a central 4-stranded antiparallel beta-shee
t covered by helices, a more flexible domain formed by two helices, an
d a C-terminal excursion connecting the subunits. The active sites are
located in a deep cleft between the subunits, The binding site of the
flavin cofactor lacks the common nucleotide binding fold and is diffe
rent from the FMN binding site found in flavodoxins.