SEQUENCE OF THE ESCHERICHIA-COLI C-HOMOPROTOCATECHUIC ACID DEGRADATIVE OPERON COMPLETED WITH THAT OF THE 2,4-DIHYDROXYHEPT-2-ENE-1,7-DIOIC ACID ALDOLASE-ENCODING GENE (HPCH)

Citation
Jm. Stringfellow et al., SEQUENCE OF THE ESCHERICHIA-COLI C-HOMOPROTOCATECHUIC ACID DEGRADATIVE OPERON COMPLETED WITH THAT OF THE 2,4-DIHYDROXYHEPT-2-ENE-1,7-DIOIC ACID ALDOLASE-ENCODING GENE (HPCH), Gene, 166(1), 1995, pp. 73-76
Citations number
14
Categorie Soggetti
Genetics & Heredity
Journal title
GeneACNP
ISSN journal
03781119
Volume
166
Issue
1
Year of publication
1995
Pages
73 - 76
Database
ISI
SICI code
0378-1119(1995)166:1<73:SOTECA>2.0.ZU;2-J
Abstract
The homoprotocatechuic acid (HPC) pathway is a typical catabolic seque nce for converting peripheral metabolites into intermediates of centra l metabolism. How the pathway enzymes that catalyse such natural seque nces have arisen is as yet uncertain, but the explanation is likely to be of interest in devising pathways to catabolise the man-made chemic als that are increasingly found in the environment. The nucleotide (nt ) sequence of the Escherichia coli C 2,4-dihydroxyhept-2-ene-1,7-dioic acid (HHED) aldolase-encoding gene (hpcH) reported here completes the sequencing of the HPC pathway genes, and so makes it possible to asse ss the relatedness of all the pathway enzymes. There were no striking amino acid (aa) sequence identities between any of the pathway enzymes , suggesting that they had not arisen by duplication of an ancestral g ene, with subsequent divergence. The HHED aldolase showed no striking identity (16-22%) with the aldolases from five other bacteria catalysi ng the analogous reaction in the catechol meta-fission pathway. Howeve r, there was significant aa identity (47.8%) with an E. coli K-12 open reading frame (ORF) of as yet unknown function, suggesting that this ORF may encode an aldolase of some kind.