SEQUENCE OF THE ESCHERICHIA-COLI C-HOMOPROTOCATECHUIC ACID DEGRADATIVE OPERON COMPLETED WITH THAT OF THE 2,4-DIHYDROXYHEPT-2-ENE-1,7-DIOIC ACID ALDOLASE-ENCODING GENE (HPCH)
Jm. Stringfellow et al., SEQUENCE OF THE ESCHERICHIA-COLI C-HOMOPROTOCATECHUIC ACID DEGRADATIVE OPERON COMPLETED WITH THAT OF THE 2,4-DIHYDROXYHEPT-2-ENE-1,7-DIOIC ACID ALDOLASE-ENCODING GENE (HPCH), Gene, 166(1), 1995, pp. 73-76
The homoprotocatechuic acid (HPC) pathway is a typical catabolic seque
nce for converting peripheral metabolites into intermediates of centra
l metabolism. How the pathway enzymes that catalyse such natural seque
nces have arisen is as yet uncertain, but the explanation is likely to
be of interest in devising pathways to catabolise the man-made chemic
als that are increasingly found in the environment. The nucleotide (nt
) sequence of the Escherichia coli C 2,4-dihydroxyhept-2-ene-1,7-dioic
acid (HHED) aldolase-encoding gene (hpcH) reported here completes the
sequencing of the HPC pathway genes, and so makes it possible to asse
ss the relatedness of all the pathway enzymes. There were no striking
amino acid (aa) sequence identities between any of the pathway enzymes
, suggesting that they had not arisen by duplication of an ancestral g
ene, with subsequent divergence. The HHED aldolase showed no striking
identity (16-22%) with the aldolases from five other bacteria catalysi
ng the analogous reaction in the catechol meta-fission pathway. Howeve
r, there was significant aa identity (47.8%) with an E. coli K-12 open
reading frame (ORF) of as yet unknown function, suggesting that this
ORF may encode an aldolase of some kind.