CLOSE EVOLUTIONARY RELATEDNESS AMONG FUNCTIONALLY DISTANTLY RELATED MEMBERS OF THE (ALPHA BETA)(8)-BARREL GLYCOSYL HYDROLASES SUGGESTED BY THE SIMILARITY OF THEIR 5TH CONSERVED SEQUENCE REGION/
S. Janecek, CLOSE EVOLUTIONARY RELATEDNESS AMONG FUNCTIONALLY DISTANTLY RELATED MEMBERS OF THE (ALPHA BETA)(8)-BARREL GLYCOSYL HYDROLASES SUGGESTED BY THE SIMILARITY OF THEIR 5TH CONSERVED SEQUENCE REGION/, FEBS letters, 377(1), 1995, pp. 6-8
A short conserved sequence equivalent to the fifth conserved sequence
region of alpha-amylases (173_LPDLD, Aspergillus oryzae alpha-amylase)
comprising the calcium-ligand aspartate, Asp-175, was identified in t
he amino acid sequences of several members of the family of (alpha/bet
a)(8)-barrel glycosyl hydrolases, Despite the fact that the aspartate
is not invariantly conserved, the stretch can be easily recognised in
all sequences to be positioned 26-28 amino acid residues in front of t
he well-known catalytic aspartate (Asp-206, A, oryzae alpha-amylase) l
ocated in the beta 4-strand of the barrel, The identification of this
region revealed remarkable similarities between some alpha-amylases (t
hose from Bacillus megaterium, Bacillus subtilis and Dictyoglomus ther
mophilum) on the one hand and several different enzyme specificities (
such as oligo-1,6-glucosidase, amylomaltase and neopullulanase, respec
tively) on the other hand, The most interesting example was offered by
B, subtilis alpha-amylase and potato amylomaltase with the regions LY
DWN and LYDWK, respectively, These observations support the idea that
all members of the family of glycosyl hydrolases adopting the structur
e of the alpha-amylase-type (alpha/beta)(8)-barrel are mutually closel
y related and the strict evolutionary borders separating the individua
l enzyme specificities can be hardly defined.