J. Caillet et al., THEORETICAL-STUDY OF THE SELF-ASSOCIATION OF AMPHOTERICIN-B, Biochimica et biophysica acta. Biomembranes, 1240(2), 1995, pp. 179-195
The aim of this present work is the study of self-association of ampho
tericin B (AmB) at a molecular level, because of its importance in the
toxicity of this antibiotic. Molecular mechanics calculations have be
en performed considering different conformations of the polar head of
AmB, the two most stable ones we have determined (B and C) and the one
issued from the X-ray data. Our calculations have shown that both hea
d-to-head and head-re-tail stable dimers were found within an energy r
ange between - 30 and - 40 kcal/mol, the very stable head-to-head dime
r with the polar head within C conformation having an energy of - 46.8
kcal/mol. We have shown that both electrostatic and Van der Waals ter
ms contribute to the total interaction energy but their relative weigh
t depends on the conformation of the polar head and on the head-to-hea
d and head-to-tail structures involved in the dimer. Thus the electros
tatic contribution does not particularly stabilize the head-to-tail di
mer. Furthermore an explicit calculation of the dipole moment in the g
round state of AmB has disproved the current assertion upon the greate
st stabilization of head-to-rail dimers by electrostatic dipole-dipole
interaction. Among all the dimers we have calculated, we have found a
group denoted G1 with a geometrical structure consistent with absorpt
ion data, namely a blue-shift of the dimer main absorption band with r
egard to the monomer one. In this group G1 we have found two isoenerge
tic (- 38.8 kcal/mol) very stable head-to-head and head-to-tail dimers
. We have found that, as a rule, the self-association of AmB in dimers
is more favourable than the complexation with the cholesterol and, in
a less extent, with the ergosterol. It seems that these features coul
d be also observed for some trimers, that we have roughly calculated.