CATALYTIC CONSEQUENCES OF EXPERIMENTAL EVOLUTION - CATALYSIS BY A 3RD-GENERATION EVOLVANT OF THE 2ND BETA-GALACTOSIDASE OF ESCHERICHIA-COLI, EBG(ABCDE), AND BY EBG(ABCD) A 2ND-GENERATION EVOLVANT CONTAINING 2 SUPPOSEDLY KINETICALLY SILENT MUTATIONS

Citation
S. Krishnan et al., CATALYTIC CONSEQUENCES OF EXPERIMENTAL EVOLUTION - CATALYSIS BY A 3RD-GENERATION EVOLVANT OF THE 2ND BETA-GALACTOSIDASE OF ESCHERICHIA-COLI, EBG(ABCDE), AND BY EBG(ABCD) A 2ND-GENERATION EVOLVANT CONTAINING 2 SUPPOSEDLY KINETICALLY SILENT MUTATIONS, Biochemical journal, 312, 1995, pp. 971-977
Citations number
31
Categorie Soggetti
Biology
Journal title
ISSN journal
02646021
Volume
312
Year of publication
1995
Part
3
Pages
971 - 977
Database
ISI
SICI code
0264-6021(1995)312:<971:CCOEE->2.0.ZU;2-C
Abstract
The kinetics of hydrolysis of a series of synthetic substrates by two experimentally evolved forms ('evolvants'), ebg(abcd) and ebg(abcde), of the second beta-galactosidase of Escherichia coli have been measure d. The ebg(abcd) enzyme differs from the wild-type (ebg(o)) enzyme by Asp92-->Asn (a) and Trp(977)-->Cys (b) changes in the large subunit, a s well as two changes hitherto considered to have no kinetic effect, S er(979)-->Gly in the large subunit (c) and Glu(122)-->Gly in the small subunit (d). The enzyme ebg(abcde) contains in addition a Glu(93)-->L ys change in the large subunit (e). Comparison of ebg(abcd) With ebg(a b) [Elliott, K, Sinnott, Smith, Bommuswamy, Guo, Hall and Zhang (1992) Biochem. J. 282, 155-164] indicates that the c and d changes in fact accelerate the hydrolysis of the glycosyl-enzyme intermediate by a fac tor of 2.5, and also decrease the charge on the aglycone oxygen atom a t the first transition state; the charge on the glycone, however, is u naltered [see K, Konstantinidis, Sinnott and Hall (1993) Biochem. J. 2 91, 15-17]. The e mutation causes a fall in the degalactosylation rate of about a factor of 3, and its occurrence only together with c and d mutations [Hall, Betts and Wootton (1989) Genetics 123, 635-648] sugg ests that degalactosylation of a hypothetical ebg(abe) enzyme would be so slow that the enzyme would have no biological advantage over the a ncestral ebg(ab). The transfer products from galactosyl-ebg(abcd) and galactosyl-ebg(abcde) to high concentrations to glucose have been meas ured; the predominant product is allolactose, but significant quantiti es of lactose are also formed; however, at apparent kinetic saturation of the galactosyl-enzyme, hydrolysis rather than transfer is the prep onderant pathway. A knowledge of the rates of enzyme-catalysed exchang e of O-18 from [1-O-18]galactose to water permits the construction of the free-energy profiles for hydrolysis of lactose by beg(abcd) and eb g(abcde). As with the other evolvants, changes in the profile away fro m the rate-determining transition state are essentially random, and th ere is no correlation between the changes in the free energies of inte rmediates and of their flanking transition states. We consider the agg regate of our kinetic data on the ebg system to be telling experimenta l support for the theoretical objections of Pettersson [Pettersson (19 92) fur. J. Biochem. 206, 289-295 and previous papers] to the Albery-K nowles theory of the evolution of enzyme kinetic activity.