The nanoelectrospray ion source (nanoES) has recently been developed a
nd described theoretically. It is different from conventional electros
pray sources and from other miniaturized electrospray sources by (i) i
ts 1-2 mu m spraying orifice achieved by pulling the spraying capillar
y to a fine tip, (ii) its very low now rate of similar to 20 nL/min an
d the small size of droplets it generates, and (iii) the absence of so
lvent pumps and inlet valves. The fabrication and operation of nanoES
needles is described in detail. Solutions with up to 0.1 M salt conten
ts could be sprayed without sheath now or pneumatic assist. Improved d
esolvation in nanoES led to instrument-limited resolution of the signa
ls of a glycoprotein and the ability to signal average extensively all
owed the C-terminal sequencing of a 40 kDa protein. Extensive mass spe
ctrometric and tandem mass spectrometric investigation of the componen
ts of an unseparated peptide mixture was demonstrated by verification
of 93% of the sequence of carbonic anhydrase. A rapid and robust desal
ting/concentration step coupled to the nanoES procedure allows the dir
ect analysis of impure samples such as peptide mixtures extracted afte
r in-gel digestion.