Sb. Haudek et al., STRAIN TYPING OF ECTOMYCORRHIZAL BASIDIOMYCETES FROM SUB-ALPINE TYROLEAN FOREST AREAS BY RANDOM AMPLIFIED POLYMORPHIC DNA ANALYSIS, Mycorrhiza, 6(1), 1996, pp. 35-41
The application of random amplified polymorphic DNA (RAPD) analysis fo
r the identifcation of ectomycorrhizal symbionts of spruce (Picea abie
s) belonging to the genera Boletus, Amanita and Lactarius at and below
the species level was investigated. Using both fingerprinting [M13, (
GTG)(5), (GACA)(4)] as well as random oligonucleotide primers (V1 and
V5), a high degree of variability of amplified DNA fragments (band-sha
ring index 65-80%) was detected between different strains of the same
species, hence enabling the identification of individual strains withi
n the same species. The band-sharing index between different species o
f the same genus (Boletus, Russula and Amanita) was in the range of 20
-30%, and similar values were obtained when strains from different tax
a were compared. Thus RAPD is too sensitive at this level of relations
hip and cannot be used to align an unknown symbiont to a given taxon.
We therefore conclude that RAPD is a promising tool for the identifica
tion of individual strains, and could thus be used to distinguish indi
genous and introduced mycorrhizal strains from the same species in nat
ural ecosystems.