A 2 year old female presenting with bilateral sporadic aniridia was fo
und to have an apparently balanced reciprocal translocation with a chr
omosome 11 breakpoint within band p13. Fluorescence in situ hybridisat
ion (FISH) studies with distal 11p13 specific cosmids showed that the
chromosome 11 breakpoint lay between the aniridia (PAX6) locus and a r
egion approximately 100 kb distal to PAX6 defined by the cosmid FO2121
. Although this patient did not have a detectable deletion within PAX6
, her aniridia may have resulted from a disruption of the distal chrom
atin domain containing either enhancers or regulators for PAX6. This c
ase may therefore be another example of aniridia caused by a position
effect as recently described in two familial aniridia patients in whic
h the phenotype cosegregated with chromosome abnormalities with 11p13
breakpoints.