Transcription of the 45S rRNA genes is carried out by RNA polymerase I
and at least two trans-acting factors, upstream binding factor (UBF)
and SL-1. We have examined the hypothesis that SL-I and UBF interact.
Coimmunoprecipitation studies using an antibody to UBF demonstrated th
at TATA-binding protein, a subunit of SL-1, associates with UBF in the
absence of DNA. Inclusion of the detergents sodium dodecyl sulfate an
d deoxycholate disrupted this interaction. In addition, partially puri
fied UBF from rat cell nuclear extracts and partially purified SL-1 fr
om human cells coimmunoprecipitated with the anti-UBF antibody after m
ixing, indicating that the UBF-SL-1 complex can re-form. Treatment of
UBF-depleted extracts with the anti-UBF antibody depleted the extracts
of SL-1 activity only if UBF was added to the extract prior to the im
munodepletion reaction. Furthermore, SL-1 activity could be recovered
in the immunoprecipitate. Interestingly, these immunoprecipitates did
not contain RNA polymerase I, as a monospecific antibody to the 194-kD
a subunit of RNA polymerase I failed to detect that subunit in the imm
unoprecipitates. Treatment of N1S1 cell extracts with the anti-UBF ant
ibody depleted the extracts of SL-1 activity but not TFIIIB activity,
suggesting that the binding of UBF to SL-1 is specific and not solely
mediated by an interaction between UBF and TATA-binding protein, which
is also a component of TFIIIB. These data provide evidence that UBF a
nd SL-1 interact.