An unexpected aspect of the expression of cloned genes is the frequent
failure of newly synthesized polypeptide chains to reach their native
state, accumulating instead as insoluble inclusion bodies, Amyloid de
posits represent a related state associated with a variety of human di
seases, The critical folding intermediates at the juncture of producti
ve folding and the off-pathway aggregation reaction have been identifi
ed for the phage P22 tailspike and coat proteins, Though the parallel
beta coil tailspike is thermostable, an early intracellular folding in
termediate is thermolabile. As the temperature of intracellular foldin
g is increased, this species partitions to inclusion bodies, a kinetic
trap within the cell, The earliest intermediates along the in vitro a
ggregation pathway, sequential multimers of the thermolabile folding i
ntermediates, have been directly identified by native gel electrophore
sis, Temperature-sensitive folding (tsf) mutations identify sites in t
he beta coil domain, which direct the junctional intermediate down the
productive pathway. Global suppressors of tsf mutants inhibit the pat
hway to inclusion bodies, rescuing the mutant chains, These mutants id
entify sites important for avoiding aggregation. Coat folding intermed
iates also partition to inclusion bodies as temperature is increased,
Coat tsf mutants are suppressed by overexpression of the GroE chaperon
in, indicating that the thermolabile intermediate is a physiological s
ubstrate for GroE. We suggest that many proteins are likely to have th
ermolabile intermediates in their intracellular folding pathways, whic
h will be precursors to inclusion body formation at elevated temperatu
res and therefore substrates for heat shock chaperonins.