OBJECT-ORIENTED DATA HANDLER FOR SEQUENCE-ANALYSIS SOFTWARE-DEVELOPMENT

Citation
Aa. Ptitsyn et Da. Grigorovich, OBJECT-ORIENTED DATA HANDLER FOR SEQUENCE-ANALYSIS SOFTWARE-DEVELOPMENT, Computer applications in the biosciences, 11(6), 1995, pp. 583-589
Citations number
13
Categorie Soggetti
Mathematical Methods, Biology & Medicine","Computer Sciences, Special Topics","Computer Science Interdisciplinary Applications","Biology Miscellaneous
ISSN journal
02667061
Volume
11
Issue
6
Year of publication
1995
Pages
583 - 589
Database
ISI
SICI code
0266-7061(1995)11:6<583:ODHFSS>2.0.ZU;2-Y
Abstract
We report an object-oriented data handler and supplementary tools for the development of molecular genetics application software for various sequence analyses. Our data handler has a flexible and expandable for mat that supports the most common data types for molecular genetic sof twave. New data types can be constructed in an object-oriented manner from the basic units. The data handler includes an object library, a f ormat-converting program and a viewer that can visualize simultaneousl y the data contained in several files to construct a general picture f rom separate data. This software has been implemented on an IBM PC-com patible personal computer.