Sv. Vinogradov et al., BLOCK POLYCATIONIC OLIGONUCLEOTIDE DERIVATIVE - SYNTHESIS AND INHIBITION OF HERPES-VIRUS REPRODUCTION, Bioconjugate chemistry, 7(1), 1996, pp. 3-6
The block polycationic oligonucleotide (oligo) consisting of a phospho
diester 12-mer linked to the polycation chain at the 3'-end and choles
teryl group at the 5'-end was synthesized. The polycation chain was gr
own on the solid support using the monomer, H-phosphonate of 1-O-(4,4'
-dimethoxytrityl)1,3-butanediol. Amino groups were introduced in the p
olymer backbone using 1,4-diaminobutane, and then the oligo chain was
formed at the free end of the polymer. The last stage of the synthesis
was the attachment of the cholesteryl group to the 5'-end of the olig
o prior to cleavage and deprotection of the copolymer. The nucleotide
sequence of this copolymer, CGTTCCTCCTGC, was complementary to the spl
icing site of immediate early (IE) mRNA 4 and 5 of herpes simplex viru
s type 1 (HSV-1). The stability of the duplexes formed between the cop
olymer and the complementary 12-mer was similar to that of unmodified
oligo. The stability of the block polycationic oligo against phosphodi
esterase digestion was significantly increased compared to that of the
unmodified oligo. The block polycationic oligo inhibited the reproduc
tion of HSV-1 in Vero cells; however, the effect was significantly les
s than the effect of 12-mer oligo modified with cholesterol at the 5'-
end. The decreased antiviral activity of the copolymer is explained by
the polycation-induced stimulation of the virus infection.