Considering the importance of nucleosome position with regard to how r
egulatory factors recognize their binding sites in chromatin, we have
investigated the inherent nucleosome positioning properties of a trans
criptional enhancer of the albumin gene. In the liver, where the album
in gene is highly expressed, the enhancer exists in an array of precis
ely positioned, nucleosome-like particles with transcription factors b
ound. In the absence of specific binding factors, such as in non-liver
tissues or in polynucleosome arrays assembled in vitro, nucleosomes a
re randomly positioned over the enhancer, Herein we investigate the in
trinsic nucleosome positioning properties of the central enhancer sequ
ence assembled into mononucleosome core particles in vitro. We find th
at the enhancer DNA prefers three translational positions, each of whi
ch utilizes different rotational settings on the nucleosome core. We c
onclude that DNA binding factors that position nucleosomes may do so b
y stabilizing one configuration out of several that can be adopted by
the underlying DNA, and that the potential exists for different positi
ons to be stabilized at different stages of development.