Hx. Zhou, CALCULATION OF TRANSLATIONAL FRICTION AND INTRINSIC-VISCOSITY .2. APPLICATION TO GLOBULAR-PROTEINS, Biophysical journal, 69(6), 1995, pp. 2298-2303
The translational friction coefficients and intrinsic viscosities of f
our globular proteins (ribonuclease A, lysozyme, myoglobin, and chymot
rypsinogen A) are calculated using atomic-level structural details. In
clusion of a 0.9-Angstrom-thick hydration shell allows calculated resu
lts for both hydrodynamic properties of each protein to reproduce expe
rimental data. The use of detailed protein structures is made possible
by relating translational friction and intrinsic viscosity to capacit
ance and polarizability, which can be calculated easily. The 0.9-Angst
rom hydration shell corresponds to a hydration level of 0.3-0.4 g wate
r/g protein. Hydration levels within this narrow range are also found
by a number of other techniques such as nuclear magnetic resonance spe
ctroscopy, infrared spectroscopy, calorimetry, and computer simulation
. The use of detailed protein structures in predicting hydrodynamic pr
operties thus allows hydrodynamic measurement to join the other techni
ques in leading to a unified picture of protein hydration. in contrast
, earlier interpretations of hydrodynamic data based on modeling prote
ins as ellipsoids gave hydration levels that varied widely from protei
n to protein and thus challenged the existence of a unified picture of
protein hydration.