A. Fischer et al., F-19 NMR OF RNA - THE STRUCTURAL AND CHEMICAL ASPECTS OF 5-FLUORO-CYTIDINE AND 5-FLUORO-URIDINE LABELING OF OLIGORIBONUCLEOTIDES, Nucleosides & nucleotides, 15(1-3), 1996, pp. 477-488
Results of PM3 semiempirical calculation revealed that energy and hydr
ogen bonds geometry of 1-methyl-5-fluoro-uracil and -cytosine base-pai
rs with 9-methyladenine and -guanine respectively are virtually the sa
me as for the natural bases. Analysis of proton coupling constants pro
ved that the sugar puckering of 5-fluorouridine and 5-fluorocytidine i
s analogous to non-modified ribonucleosides. 5-Fluorocytidine was regi
oselectively introduced to oligoribonucleotides, prepared using 2'-O-t
ert-dimethylsilyl protection, via post-synthetic quantitative ammonoly
sis of 4-O-methyl-5-fluorouridine derived precursor.